{"num_pairs":34,"pairs":[{"index":1,"nt1":"|1|A|G|1||||","nt2":"|1|A|C|72||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":2,"nt1":"|1|A|C|2||||","nt2":"|1|A|G|71||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":3,"nt1":"|1|A|G|3||||","nt2":"|1|A|C|70||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":4,"nt1":"|1|A|G|4||||","nt2":"|1|A|U|69||||","bp":"G-U","name":"Wobble","Saenger":"28-XXVIII","LW":"cWW","DSSR":"cW-W"},{"index":5,"nt1":"|1|A|A|5||||","nt2":"|1|A|U|68||||","bp":"A-U","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":6,"nt1":"|1|A|U|6||||","nt2":"|1|A|A|67||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":7,"nt1":"|1|A|U|7||||","nt2":"|1|A|A|66||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":8,"nt1":"|1|A|U|8||||","nt2":"|1|A|A|14||||","bp":"U-A","name":"rHoogsteen","Saenger":"24-XXIV","LW":"tWH","DSSR":"tW-M"},{"index":9,"nt1":"|1|A|U|8||||","nt2":"|1|A|A|21||||","bp":"U+A","name":"--","Saenger":"--","LW":"tSW","DSSR":"tm+W"},{"index":10,"nt1":"|1|A|A|9||||","nt2":"|1|A|A|23||||","bp":"A+A","name":"--","Saenger":"02-II","LW":"tHH","DSSR":"tM+M"},{"index":11,"nt1":"|1|A|2MG|10||||","nt2":"|1|A|C|25||||","bp":"g-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":12,"nt1":"|1|A|2MG|10||||","nt2":"|1|A|G|45||||","bp":"g+G","name":"--","Saenger":"--","LW":"cHS","DSSR":"cM+m"},{"index":13,"nt1":"|1|A|C|11||||","nt2":"|1|A|G|24||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":14,"nt1":"|1|A|U|12||||","nt2":"|1|A|A|23||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":15,"nt1":"|1|A|C|13||||","nt2":"|1|A|G|22||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":16,"nt1":"|1|A|G|15||||","nt2":"|1|A|C|48||||","bp":"G+C","name":"rWC","Saenger":"22-XXII","LW":"tWW","DSSR":"tW+W"},{"index":17,"nt1":"|1|A|H2U|16||||","nt2":"|1|A|U|59||||","bp":"u+U","name":"--","Saenger":"--","LW":"tSW","DSSR":"tm+W"},{"index":18,"nt1":"|1|A|G|18||||","nt2":"|1|A|PSU|55||||","bp":"G+P","name":"--","Saenger":"--","LW":"tWS","DSSR":"tW+m"},{"index":19,"nt1":"|1|A|G|19||||","nt2":"|1|A|C|56||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":20,"nt1":"|1|A|G|22||||","nt2":"|1|A|7MG|46||||","bp":"G-g","name":"--","Saenger":"07-VII","LW":"tHW","DSSR":"tM-W"},{"index":21,"nt1":"|1|A|M2G|26||||","nt2":"|1|A|A|44||||","bp":"g-A","name":"Imino","Saenger":"08-VIII","LW":"cWW","DSSR":"cW-W"},{"index":22,"nt1":"|1|A|C|27||||","nt2":"|1|A|G|43||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":23,"nt1":"|1|A|C|28||||","nt2":"|1|A|G|42||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":24,"nt1":"|1|A|A|29||||","nt2":"|1|A|U|41||||","bp":"A-U","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":25,"nt1":"|1|A|G|30||||","nt2":"|1|A|5MC|40||||","bp":"G-c","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":26,"nt1":"|1|A|A|31||||","nt2":"|1|A|PSU|39||||","bp":"A-P","name":"--","Saenger":"--","LW":"cWW","DSSR":"cW-W"},{"index":27,"nt1":"|1|A|OMC|32||||","nt2":"|1|A|A|38||||","bp":"c-A","name":"--","Saenger":"--","LW":"c.W","DSSR":"c.-W"},{"index":28,"nt1":"|1|A|U|33||||","nt2":"|1|A|A|36||||","bp":"U-A","name":"--","Saenger":"--","LW":"tSH","DSSR":"tm-M"},{"index":29,"nt1":"|1|A|5MC|49||||","nt2":"|1|A|G|65||||","bp":"c-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":30,"nt1":"|1|A|U|50||||","nt2":"|1|A|A|64||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":31,"nt1":"|1|A|G|51||||","nt2":"|1|A|C|63||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":32,"nt1":"|1|A|U|52||||","nt2":"|1|A|A|62||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":33,"nt1":"|1|A|G|53||||","nt2":"|1|A|C|61||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":34,"nt1":"|1|A|5MU|54||||","nt2":"|1|A|1MA|58||||","bp":"t-a","name":"rHoogsteen","Saenger":"24-XXIV","LW":"tWH","DSSR":"tW-M"}],"num_multiplets":4,"multiplets":[{"index":1,"num_nts":3,"nts_short":"UAA","nts_long":"|1|A|U|8||||,|1|A|A|14||||,|1|A|A|21||||","planarity":0.252},{"index":2,"num_nts":3,"nts_short":"AUA","nts_long":"|1|A|A|9||||,|1|A|U|12||||,|1|A|A|23||||","planarity":0.203},{"index":3,"num_nts":3,"nts_short":"gCG","nts_long":"|1|A|2MG|10||||,|1|A|C|25||||,|1|A|G|45||||","planarity":0.465},{"index":4,"num_nts":3,"nts_short":"CGg","nts_long":"|1|A|C|13||||,|1|A|G|22||||,|1|A|7MG|46||||","planarity":0.149}],"num_helices":2,"helices":[{"index":1,"num_stems":2,"strand1":"GCGGAUUcUGUGtPC","strand2":"CGCUUAAGACACaGG","bp_type":"||||||||||||..|","helix_form":"AA....xAAAAxx.","num_pairs":15,"pairs":[{"index":1,"nt1":"|1|A|G|1||||","nt2":"|1|A|C|72||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":2,"nt1":"|1|A|C|2||||","nt2":"|1|A|G|71||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":3,"nt1":"|1|A|G|3||||","nt2":"|1|A|C|70||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":4,"nt1":"|1|A|G|4||||","nt2":"|1|A|U|69||||","bp":"G-U","name":"Wobble","Saenger":"28-XXVIII","LW":"cWW","DSSR":"cW-W"},{"index":5,"nt1":"|1|A|A|5||||","nt2":"|1|A|U|68||||","bp":"A-U","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":6,"nt1":"|1|A|U|6||||","nt2":"|1|A|A|67||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":7,"nt1":"|1|A|U|7||||","nt2":"|1|A|A|66||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":8,"nt1":"|1|A|5MC|49||||","nt2":"|1|A|G|65||||","bp":"c-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":9,"nt1":"|1|A|U|50||||","nt2":"|1|A|A|64||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":10,"nt1":"|1|A|G|51||||","nt2":"|1|A|C|63||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":11,"nt1":"|1|A|U|52||||","nt2":"|1|A|A|62||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":12,"nt1":"|1|A|G|53||||","nt2":"|1|A|C|61||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":13,"nt1":"|1|A|5MU|54||||","nt2":"|1|A|1MA|58||||","bp":"t-a","name":"rHoogsteen","Saenger":"24-XXIV","LW":"tWH","DSSR":"tW-M"},{"index":14,"nt1":"|1|A|PSU|55||||","nt2":"|1|A|G|18||||","bp":"P+G","name":"--","Saenger":"--","LW":"tSW","DSSR":"tm+W"},{"index":15,"nt1":"|1|A|C|56||||","nt2":"|1|A|G|19||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"}]},{"index":2,"num_stems":2,"strand1":"AAPcUGGAgCUCAGu","strand2":"UcAGACCgCGAGUCU","bp_type":"...||||.||||...","helix_form":"x..AAAAxAA.xxx","num_pairs":15,"pairs":[{"index":1,"nt1":"|1|A|A|36||||","nt2":"|1|A|U|33||||","bp":"A-U","name":"--","Saenger":"--","LW":"tHS","DSSR":"tM-m"},{"index":2,"nt1":"|1|A|A|38||||","nt2":"|1|A|OMC|32||||","bp":"A-c","name":"--","Saenger":"--","LW":"cW.","DSSR":"cW-."},{"index":3,"nt1":"|1|A|PSU|39||||","nt2":"|1|A|A|31||||","bp":"P-A","name":"--","Saenger":"--","LW":"cWW","DSSR":"cW-W"},{"index":4,"nt1":"|1|A|5MC|40||||","nt2":"|1|A|G|30||||","bp":"c-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":5,"nt1":"|1|A|U|41||||","nt2":"|1|A|A|29||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":6,"nt1":"|1|A|G|42||||","nt2":"|1|A|C|28||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":7,"nt1":"|1|A|G|43||||","nt2":"|1|A|C|27||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":8,"nt1":"|1|A|A|44||||","nt2":"|1|A|M2G|26||||","bp":"A-g","name":"Imino","Saenger":"08-VIII","LW":"cWW","DSSR":"cW-W"},{"index":9,"nt1":"|1|A|2MG|10||||","nt2":"|1|A|C|25||||","bp":"g-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":10,"nt1":"|1|A|C|11||||","nt2":"|1|A|G|24||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":11,"nt1":"|1|A|U|12||||","nt2":"|1|A|A|23||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":12,"nt1":"|1|A|C|13||||","nt2":"|1|A|G|22||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":13,"nt1":"|1|A|A|14||||","nt2":"|1|A|U|8||||","bp":"A-U","name":"rHoogsteen","Saenger":"24-XXIV","LW":"tHW","DSSR":"tM-W"},{"index":14,"nt1":"|1|A|G|15||||","nt2":"|1|A|C|48||||","bp":"G+C","name":"rWC","Saenger":"22-XXII","LW":"tWW","DSSR":"tW+W"},{"index":15,"nt1":"|1|A|H2U|16||||","nt2":"|1|A|U|59||||","bp":"u+U","name":"--","Saenger":"--","LW":"tSW","DSSR":"tm+W"}]}],"num_stems":4,"stems":[{"index":1,"helix_index":1,"strand1":"GCGGAUU","strand2":"CGCUUAA","bp_type":"|||||||","helix_form":"AA....","num_pairs":7,"pairs":[{"index":1,"nt1":"|1|A|G|1||||","nt2":"|1|A|C|72||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":2,"nt1":"|1|A|C|2||||","nt2":"|1|A|G|71||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":3,"nt1":"|1|A|G|3||||","nt2":"|1|A|C|70||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":4,"nt1":"|1|A|G|4||||","nt2":"|1|A|U|69||||","bp":"G-U","name":"Wobble","Saenger":"28-XXVIII","LW":"cWW","DSSR":"cW-W"},{"index":5,"nt1":"|1|A|A|5||||","nt2":"|1|A|U|68||||","bp":"A-U","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":6,"nt1":"|1|A|U|6||||","nt2":"|1|A|A|67||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":7,"nt1":"|1|A|U|7||||","nt2":"|1|A|A|66||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"}]},{"index":2,"helix_index":2,"strand1":"gCUC","strand2":"CGAG","bp_type":"||||","helix_form":"AA.","num_pairs":4,"pairs":[{"index":1,"nt1":"|1|A|2MG|10||||","nt2":"|1|A|C|25||||","bp":"g-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":2,"nt1":"|1|A|C|11||||","nt2":"|1|A|G|24||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":3,"nt1":"|1|A|U|12||||","nt2":"|1|A|A|23||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":4,"nt1":"|1|A|C|13||||","nt2":"|1|A|G|22||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"}]},{"index":3,"helix_index":2,"strand1":"CCAG","strand2":"GGUc","bp_type":"||||","helix_form":"AAA","num_pairs":4,"pairs":[{"index":1,"nt1":"|1|A|C|27||||","nt2":"|1|A|G|43||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":2,"nt1":"|1|A|C|28||||","nt2":"|1|A|G|42||||","bp":"C-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":3,"nt1":"|1|A|A|29||||","nt2":"|1|A|U|41||||","bp":"A-U","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":4,"nt1":"|1|A|G|30||||","nt2":"|1|A|5MC|40||||","bp":"G-c","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"}]},{"index":4,"helix_index":1,"strand1":"cUGUG","strand2":"GACAC","bp_type":"|||||","helix_form":"AAAA","num_pairs":5,"pairs":[{"index":1,"nt1":"|1|A|5MC|49||||","nt2":"|1|A|G|65||||","bp":"c-G","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":2,"nt1":"|1|A|U|50||||","nt2":"|1|A|A|64||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":3,"nt1":"|1|A|G|51||||","nt2":"|1|A|C|63||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"},{"index":4,"nt1":"|1|A|U|52||||","nt2":"|1|A|A|62||||","bp":"U-A","name":"WC","Saenger":"20-XX","LW":"cWW","DSSR":"cW-W"},{"index":5,"nt1":"|1|A|G|53||||","nt2":"|1|A|C|61||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"}]}],"num_isoCanonPairs":1,"isoCanonPairs":[{"index":-1,"helix_index":1,"nt1":"|1|A|G|19||||","nt2":"|1|A|C|56||||","bp":"G-C","name":"WC","Saenger":"19-XIX","LW":"cWW","DSSR":"cW-W"}],"num_coaxStacks":2,"coaxStacks":[{"index":1,"helix_index":1,"num_stems":2,"stem_indices":[1,4]},{"index":2,"helix_index":2,"num_stems":2,"stem_indices":[3,2]}],"num_stacks":11,"stacks":[{"index":1,"num_nts":2,"nts_short":"Uc","nts_long":"|1|A|U|7||||,|1|A|5MC|49||||"},{"index":2,"num_nts":2,"nts_short":"UC","nts_long":"|1|A|U|8||||,|1|A|C|13||||"},{"index":3,"num_nts":2,"nts_short":"GA","nts_long":"|1|A|G|65||||,|1|A|A|66||||"},{"index":4,"num_nts":3,"nts_short":"CgC","nts_long":"|1|A|C|25||||,|1|A|M2G|26||||,|1|A|C|27||||"},{"index":5,"num_nts":3,"nts_short":"gAC","nts_long":"|1|A|7MG|46||||,|1|A|A|21||||,|1|A|C|48||||"},{"index":6,"num_nts":3,"nts_short":"GtP","nts_long":"|1|A|G|53||||,|1|A|5MU|54||||,|1|A|PSU|55||||"},{"index":7,"num_nts":4,"nts_short":"GACC","nts_long":"|1|A|G|1||||,|1|A|A|73||||,|1|A|C|74||||,|1|A|C|75||||"},{"index":8,"num_nts":4,"nts_short":"GAcU","nts_long":"|1|A|G|30||||,|1|A|A|31||||,|1|A|OMC|32||||,|1|A|U|33||||"},{"index":9,"num_nts":5,"nts_short":"GGGaC","nts_long":"|1|A|G|19||||,|1|A|G|57||||,|1|A|G|18||||,|1|A|1MA|58||||,|1|A|C|61||||"},{"index":10,"num_nts":7,"nts_short":"gAAgAPc","nts_long":"|1|A|OMG|34||||,|1|A|A|35||||,|1|A|A|36||||,|1|A|YYG|37||||,|1|A|A|38||||,|1|A|PSU|39||||,|1|A|5MC|40||||"},{"index":11,"num_nts":9,"nts_short":"GAGAGAGUC","nts_long":"|1|A|G|43||||,|1|A|A|44||||,|1|A|G|45||||,|1|A|A|9||||,|1|A|G|22||||,|1|A|A|14||||,|1|A|G|15||||,|1|A|U|59||||,|1|A|C|60||||"}],"nonStack":{"num_nts":4,"nts_short":"uGUA","nts_long":"|1|A|H2U|17||||,|1|A|G|20||||,|1|A|U|47||||,|1|A|A|76||||"},"num_atom2bases":4,"atom2bases":[{"index":1,"type":"phosphate","atom":"|1|A|H2U|16|OP2|||","nt":"|1|A|H2U|16||||","vert_dist":2.594},{"index":2,"type":"phosphate","atom":"|1|A|A|35|OP2|||","nt":"|1|A|U|33||||","vert_dist":2.849},{"index":3,"type":"sugar","atom":"|1|A|U|59|O4'|||","nt":"|1|A|C|48||||","vert_dist":3.097},{"index":4,"type":"phosphate","atom":"|1|A|G|57|OP2|||","nt":"|1|A|PSU|55||||","vert_dist":2.897}],"num_hairpins":3,"hairpins":[{"index":1,"type":"hairpin loop","bridging_nts":[8],"stem_indices":[2],"summary":"[1] 8 [A.13 A.22] 4","num_nts":10,"nts_short":"CAGuuGGGAG","nts_long":"|1|A|C|13||||,|1|A|A|14||||,|1|A|G|15||||,|1|A|H2U|16||||,|1|A|H2U|17||||,|1|A|G|18||||,|1|A|G|19||||,|1|A|G|20||||,|1|A|A|21||||,|1|A|G|22||||","num_stems":1,"bridges":[{"index":1,"num_nts":8,"nts_short":"AGuuGGGA","nts_long":"|1|A|A|14||||,|1|A|G|15||||,|1|A|H2U|16||||,|1|A|H2U|17||||,|1|A|G|18||||,|1|A|G|19||||,|1|A|G|20||||,|1|A|A|21||||"}]},{"index":2,"type":"hairpin loop","bridging_nts":[9],"stem_indices":[3],"summary":"[1] 9 [A.30 A.40] 4","num_nts":11,"nts_short":"GAcUgAAgAPc","nts_long":"|1|A|G|30||||,|1|A|A|31||||,|1|A|OMC|32||||,|1|A|U|33||||,|1|A|OMG|34||||,|1|A|A|35||||,|1|A|A|36||||,|1|A|YYG|37||||,|1|A|A|38||||,|1|A|PSU|39||||,|1|A|5MC|40||||","num_stems":1,"bridges":[{"index":1,"num_nts":9,"nts_short":"AcUgAAgAP","nts_long":"|1|A|A|31||||,|1|A|OMC|32||||,|1|A|U|33||||,|1|A|OMG|34||||,|1|A|A|35||||,|1|A|A|36||||,|1|A|YYG|37||||,|1|A|A|38||||,|1|A|PSU|39||||"}]},{"index":3,"type":"hairpin loop","bridging_nts":[7],"stem_indices":[4],"summary":"[1] 7 [A.53 A.61] 5","num_nts":9,"nts_short":"GtPCGaUCC","nts_long":"|1|A|G|53||||,|1|A|5MU|54||||,|1|A|PSU|55||||,|1|A|C|56||||,|1|A|G|57||||,|1|A|1MA|58||||,|1|A|U|59||||,|1|A|C|60||||,|1|A|C|61||||","num_stems":1,"bridges":[{"index":1,"num_nts":7,"nts_short":"tPCGaUC","nts_long":"|1|A|5MU|54||||,|1|A|PSU|55||||,|1|A|C|56||||,|1|A|G|57||||,|1|A|1MA|58||||,|1|A|U|59||||,|1|A|C|60||||"}]}],"num_junctions":1,"junctions":[{"index":1,"type":"4-way junction","bridging_nts":[2,1,5,0],"stem_indices":[1,2,3,4],"summary":"[4] 2 1 5 0 [A.7 A.66 A.10 A.25 A.27 A.43 A.49 A.65] 7 4 4 5","num_nts":16,"nts_short":"UUAgCgCGAGgUCcGA","nts_long":"|1|A|U|7||||,|1|A|U|8||||,|1|A|A|9||||,|1|A|2MG|10||||,|1|A|C|25||||,|1|A|M2G|26||||,|1|A|C|27||||,|1|A|G|43||||,|1|A|A|44||||,|1|A|G|45||||,|1|A|7MG|46||||,|1|A|U|47||||,|1|A|C|48||||,|1|A|5MC|49||||,|1|A|G|65||||,|1|A|A|66||||","num_stems":4,"bridges":[{"index":1,"num_nts":2,"nts_short":"UA","nts_long":"|1|A|U|8||||,|1|A|A|9||||"},{"index":2,"num_nts":1,"nts_short":"g","nts_long":"|1|A|M2G|26||||"},{"index":3,"num_nts":5,"nts_short":"AGgUC","nts_long":"|1|A|A|44||||,|1|A|G|45||||,|1|A|7MG|46||||,|1|A|U|47||||,|1|A|C|48||||"},{"index":4,"num_nts":0,"nts_short":"","nts_long":""}]}],"num_ssSegments":1,"ssSegments":[{"index":1,"num_nts":4,"nts_short":"ACCA","nts_long":"|1|A|A|73||||,|1|A|C|74||||,|1|A|C|75||||,|1|A|A|76||||"}],"num_kissingLoops":1,"kissingLoops":[{"index":1,"stem_index":-1,"is_isoCanonPair":true,"hairpin_indices":[1,3]}],"num_splayUnits":6,"splayUnits":[{"index":1,"num_nts":2,"nts_short":"UU","nts_long":"|1|A|U|7||||,|1|A|U|8||||"},{"index":2,"num_nts":3,"nts_short":"uuG","nts_long":"|1|A|H2U|16||||,|1|A|H2U|17||||,|1|A|G|18||||"},{"index":3,"num_nts":2,"nts_short":"GG","nts_long":"|1|A|G|19||||,|1|A|G|20||||"},{"index":4,"num_nts":4,"nts_short":"gUCc","nts_long":"|1|A|7MG|46||||,|1|A|U|47||||,|1|A|C|48||||,|1|A|5MC|49||||"},{"index":5,"num_nts":2,"nts_short":"CC","nts_long":"|1|A|C|60||||,|1|A|C|61||||"},{"index":6,"num_nts":2,"nts_short":"CA","nts_long":"|1|A|C|75||||,|1|A|A|76||||"}],"ct":["   76","    1 G     0     2    72     1","    2 C     1     3    71     2","    3 G     2     4    70     3","    4 G     3     5    69     4","    5 A     4     6    68     5","    6 U     5     7    67     6","    7 U     6     8    66     7","    8 U     7     9     0     8","    9 A     8    10     0     9","   10 g     9    11    25    10","   11 C    10    12    24    11","   12 U    11    13    23    12","   13 C    12    14    22    13","   14 A    13    15     0    14","   15 G    14    16     0    15","   16 u    15    17     0    16","   17 u    16    18     0    17","   18 G    17    19     0    18","   19 G    18    20    56    19","   20 G    19    21     0    20","   21 A    20    22     0    21","   22 G    21    23    13    22","   23 A    22    24    12    23","   24 G    23    25    11    24","   25 C    24    26    10    25","   26 g    25    27     0    26","   27 C    26    28    43    27","   28 C    27    29    42    28","   29 A    28    30    41    29","   30 G    29    31    40    30","   31 A    30    32     0    31","   32 c    31    33     0    32","   33 U    32    34     0    33","   34 g    33    35     0    34","   35 A    34    36     0    35","   36 A    35    37     0    36","   37 g    36    38     0    37","   38 A    37    39     0    38","   39 P    38    40     0    39","   40 c    39    41    30    40","   41 U    40    42    29    41","   42 G    41    43    28    42","   43 G    42    44    27    43","   44 A    43    45     0    44","   45 G    44    46     0    45","   46 g    45    47     0    46","   47 U    46    48     0    47","   48 C    47    49     0    48","   49 c    48    50    65    49","   50 U    49    51    64    50","   51 G    50    52    63    51","   52 U    51    53    62    52","   53 G    52    54    61    53","   54 t    53    55     0    54","   55 P    54    56     0    55","   56 C    55    57    19    56","   57 G    56    58     0    57","   58 a    57    59     0    58","   59 U    58    60     0    59","   60 C    59    61     0    60","   61 C    60    62    53    61","   62 A    61    63    52    62","   63 C    62    64    51    63","   64 A    63    65    50    64","   65 G    64    66    49    65","   66 A    65    67     7    66","   67 A    66    68     6    67","   68 U    67    69     5    68","   69 U    68    70     4    69","   70 C    69    71     3    70","   71 G    70    72     2    71","   72 C    71    73     1    72","   73 A    72    74     0    73","   74 C    73    75     0    74","   75 C    74    76     0    75","   76 A    75     0     0    76"],"dbn":{"all_chains":{"num_nts":76,"num_chars":76,"bseq":"GCGGAUUUAgCUCAGuuGGGAGAGCgCCAGAcUgAAgAPcUGGAGgUCcUGUGtPCGaUCCACAGAAUUCGCACCA","bseqUP":"GCGGAUUUAGCUCAGUUGGGAGAGCGCCAGACUGAAGAUCUGGAGGUCCUGUGTUCGAUCCACAGAAUUCGCACCA","sstr":"(((((((..((((.....[..)))).((((.........)))).....(((((..]....))))))))))))....","form":"AAAAAA...AA..........AAA.AAAA.AA.....AAAAAA.....AAAAA.......AAAAAAAAAAAAA..-"},"m1_chain_A":{"num_nts":76,"num_chars":76,"bseq":"GCGGAUUUAgCUCAGuuGGGAGAGCgCCAGAcUgAAgAPcUGGAGgUCcUGUGtPCGaUCCACAGAAUUCGCACCA","bseqUP":"GCGGAUUUAGCUCAGUUGGGAGAGCGCCAGACUGAAGAUCUGGAGGUCCUGUGTUCGAUCCACAGAAUUCGCACCA","sstr":"(((((((..((((.....[..)))).((((.........)))).....(((((..]....))))))))))))....","form":"AAAAAA...AA..........AAA.AAAA.AA.....AAAAAA.....AAAAA.......AAAAAAAAAAAAA..-"}},"chains":{"m1_chain_A":{"num_nts":76,"bseq":"GCGGAUUUAgCUCAGuuGGGAGAGCgCCAGAcUgAAgAPcUGGAGgUCcUGUGtPCGaUCCACAGAAUUCGCACCA","sstr":"(((((((..((((.....[..)))).((((.........)))).....(((((..]....))))))))))))....","form":"AAAAAA...AA..........AAA.AAAA.AA.....AAAAAA.....AAAAA.......AAAAAAAAAAAAA..-","helical_rise":0.086,"helical_rise_std":2.856,"helical_axis":[0.211,-0.773,0.599],"point1":[67.886,39.023,38.766],"point2":[69.160,34.356,42.383],"num_chars":226,"suite":"G1aC1aG1aG1aA1aU1bU2aU1[A2gg1aC1aU1cC!!A1aG!!u!!u5pG4bG2aG!!A1fG1aA1aG1aC1ag1aC1aC1aA1aG1aA1ac1aU1gg1aA1aA1ag1aA1aP1ac1aU1aG1aG1aA1aG1[g4pU2uC6dc1aU1aG1aU1aG1at1aP1gC1aG1[a4dU1bC2aC1aA1aC1aA1aG1aA1aA1aU1aU1aC1aG1aC1aA1aC1aC!!A"}},"num_nts":76,"nts":[{"index":1,"index_chain":1,"chain_name":"A","nt_resnum":1,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|1||||","linked_nts":[null,"|1|A|C|2||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix-end,stem-end,coaxial-stack","alpha":null,"beta":-128.053,"gamma":67.793,"delta":82.863,"epsilon":-155.568,"zeta":-68.623,"epsilon_zeta":-86.945,"bb_type":"BI","chi":-167.790,"glyco_bond":"anti","C5prime_xyz":[-1.361,8.662,1.014],"P_xyz":[1.048,8.449,2.164],"form":"A","ssZp":4.587,"Dp":4.572,"splay_angle":24.922,"splay_distance":3.947,"splay_ratio":0.219,"eta":null,"theta":-139.340,"eta_prime":null,"theta_prime":-136.537,"eta_base":null,"theta_base":-110.796,"v0":1.657,"v1":-23.359,"v2":35.103,"v3":-35.153,"v4":21.094,"amplitude":36.540,"phase_angle":16.123,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"inc","cluster":"__","suiteness":0.000,"filter_rmsd":0.008,"frame":{"rmsd":0.008,"origin":[53.757,41.868,52.930],"x_axis":[-0.259,-0.250,-0.933],"y_axis":[-0.543,0.837,-0.073],"z_axis":[0.799,0.488,-0.352],"quaternion":[0.554,-0.253,0.782,0.133]}},{"index":2,"index_chain":2,"chain_name":"A","nt_resnum":2,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|2||||","linked_nts":["|1|A|G|1||||","|1|A|G|3||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-67.449,"beta":-178.393,"gamma":53.832,"delta":83.378,"epsilon":-145.149,"zeta":-76.788,"epsilon_zeta":-68.361,"bb_type":"BI","chi":-163.824,"glyco_bond":"anti","C5prime_xyz":[-1.358,8.777,0.745],"P_xyz":[1.218,9.198,1.232],"form":"A","ssZp":4.522,"Dp":4.633,"splay_angle":21.151,"splay_distance":3.385,"splay_ratio":0.185,"eta":171.857,"theta":-144.613,"eta_prime":-175.499,"theta_prime":-144.050,"eta_base":-136.052,"theta_base":-118.146,"v0":1.602,"v1":-23.203,"v2":34.778,"v3":-34.782,"v4":20.910,"amplitude":36.197,"phase_angle":16.096,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.935,"filter_rmsd":0.063,"frame":{"rmsd":0.006,"origin":[57.144,41.860,50.905],"x_axis":[-0.594,0.224,-0.773],"y_axis":[-0.294,0.833,0.468],"z_axis":[0.749,0.506,-0.429],"quaternion":[0.450,-0.021,0.845,0.288]}},{"index":3,"index_chain":3,"chain_name":"A","nt_resnum":3,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|3||||","linked_nts":["|1|A|C|2||||","|1|A|G|4||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-74.460,"beta":169.695,"gamma":59.477,"delta":80.733,"epsilon":-148.283,"zeta":-80.025,"epsilon_zeta":-68.258,"bb_type":"BI","chi":-161.889,"glyco_bond":"anti","C5prime_xyz":[-1.390,8.782,0.807],"P_xyz":[1.190,9.276,0.504],"form":"A","ssZp":4.751,"Dp":4.694,"splay_angle":22.275,"splay_distance":3.642,"splay_ratio":0.198,"eta":160.224,"theta":-151.359,"eta_prime":173.873,"theta_prime":-153.944,"eta_base":-144.998,"theta_base":-143.692,"v0":2.697,"v1":-25.146,"v2":36.840,"v3":-36.112,"v4":21.205,"amplitude":38.064,"phase_angle":14.572,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.868,"filter_rmsd":0.021,"frame":{"rmsd":0.021,"origin":[59.278,42.479,48.350],"x_axis":[-0.722,0.590,-0.362],"y_axis":[0.154,0.646,0.748],"z_axis":[0.675,0.484,-0.557],"quaternion":[0.303,0.217,0.855,0.360]}},{"index":4,"index_chain":4,"chain_name":"A","nt_resnum":4,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|4||||","linked_nts":["|1|A|G|3||||","|1|A|A|5||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-64.437,"beta":162.194,"gamma":60.724,"delta":82.164,"epsilon":-157.372,"zeta":-68.659,"epsilon_zeta":-88.713,"bb_type":"BI","chi":-168.671,"glyco_bond":"anti","C5prime_xyz":[-1.727,8.755,1.067],"P_xyz":[0.779,9.533,0.854],"form":"A","ssZp":4.679,"Dp":4.570,"splay_angle":25.219,"splay_distance":3.789,"splay_ratio":0.219,"eta":164.347,"theta":-144.590,"eta_prime":177.672,"theta_prime":-144.150,"eta_base":-154.830,"theta_base":-98.750,"v0":-1.602,"v1":-22.347,"v2":36.300,"v3":-38.169,"v4":25.042,"amplitude":38.834,"phase_angle":20.813,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.842,"filter_rmsd":0.018,"frame":{"rmsd":0.018,"origin":[60.864,42.628,45.075],"x_axis":[-0.698,0.716,0.017],"y_axis":[0.474,0.443,0.761],"z_axis":[0.538,0.539,-0.648],"quaternion":[0.156,0.356,0.835,0.389]}},{"index":5,"index_chain":5,"chain_name":"A","nt_resnum":5,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|5||||","linked_nts":["|1|A|G|4||||","|1|A|U|6||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-74.745,"beta":-176.472,"gamma":53.356,"delta":84.944,"epsilon":-137.465,"zeta":-81.718,"epsilon_zeta":-55.747,"bb_type":"BI","chi":-162.858,"glyco_bond":"anti","C5prime_xyz":[-1.360,8.514,0.725],"P_xyz":[1.251,8.672,1.082],"form":"A","ssZp":4.494,"Dp":4.758,"splay_angle":22.044,"splay_distance":3.547,"splay_ratio":0.196,"eta":166.919,"theta":-138.144,"eta_prime":-178.332,"theta_prime":-135.795,"eta_base":-116.296,"theta_base":-111.569,"v0":10.087,"v1":-32.588,"v2":41.514,"v3":-36.576,"v4":16.742,"amplitude":41.657,"phase_angle":4.762,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.847,"filter_rmsd":0.037,"frame":{"rmsd":0.018,"origin":[60.646,45.663,42.817],"x_axis":[-0.161,0.766,0.622],"y_axis":[0.875,-0.181,0.448],"z_axis":[0.456,0.617,-0.642],"quaternion":[-0.065,0.645,0.637,0.418]}},{"index":6,"index_chain":6,"chain_name":"A","nt_resnum":6,"nt_name":"U","nt_code":"U","nt_id":"|1|A|U|6||||","linked_nts":["|1|A|A|5||||","|1|A|U|7||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-48.819,"beta":157.567,"gamma":55.308,"delta":81.262,"epsilon":-150.997,"zeta":-77.008,"epsilon_zeta":-73.989,"bb_type":"BI","chi":-160.025,"glyco_bond":"anti","C5prime_xyz":[-1.787,8.781,0.521],"P_xyz":[0.764,9.406,0.402],"form":"A","ssZp":4.307,"Dp":4.508,"splay_angle":22.887,"splay_distance":3.710,"splay_ratio":0.201,"eta":172.068,"theta":-149.750,"eta_prime":-170.792,"theta_prime":-143.916,"eta_base":-130.086,"theta_base":-126.490,"v0":0.331,"v1":-24.026,"v2":37.286,"v3":-38.126,"v4":23.858,"amplitude":39.240,"phase_angle":18.154,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.664,"filter_rmsd":0.103,"frame":{"rmsd":0.011,"origin":[60.442,48.835,41.243],"x_axis":[0.285,0.503,0.816],"y_axis":[0.887,-0.461,-0.026],"z_axis":[0.363,0.731,-0.578],"quaternion":[-0.248,0.762,0.456,0.387]}},{"index":7,"index_chain":7,"chain_name":"A","nt_resnum":7,"nt_name":"U","nt_code":"U","nt_id":"|1|A|U|7||||","linked_nts":["|1|A|U|6||||","|1|A|U|8||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C2'-endo,canonical,non-pair-contact,helix,stem-end,coaxial-stack,junction-loop,splayed-apart","alpha":-59.498,"beta":-178.720,"gamma":62.506,"delta":137.257,"epsilon":-105.934,"zeta":-51.960,"epsilon_zeta":-53.974,"bb_type":"--","chi":-133.079,"glyco_bond":"anti","C5prime_xyz":[-2.053,8.725,-0.593],"P_xyz":[0.375,9.520,0.116],"form":".","ssZp":1.554,"Dp":1.414,"splay_angle":126.992,"splay_distance":17.232,"splay_ratio":0.895,"eta":-158.006,"theta":-42.717,"eta_prime":-138.693,"theta_prime":-60.651,"eta_base":-120.507,"theta_base":-31.462,"v0":-24.390,"v1":35.434,"v2":-32.415,"v3":18.912,"v4":3.251,"amplitude":35.449,"phase_angle":156.123,"puckering":"C2'-endo","sugar_class":"~C2'-endo","bin":"32p","cluster":"1b","suiteness":0.803,"filter_rmsd":0.105,"frame":{"rmsd":0.008,"origin":[60.615,52.328,40.005],"x_axis":[0.526,-0.038,0.849],"y_axis":[0.693,-0.561,-0.454],"z_axis":[0.493,0.827,-0.269],"quaternion":[-0.417,0.767,0.213,0.437]}},{"index":8,"index_chain":8,"chain_name":"A","nt_resnum":8,"nt_name":"U","nt_code":"U","nt_id":"|1|A|U|8||||","linked_nts":["|1|A|U|7||||","|1|A|A|9||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C3'-endo,non-canonical,non-pair-contact,helix,multiplet,junction-loop,splayed-apart","alpha":-83.821,"beta":-145.649,"gamma":55.418,"delta":78.644,"epsilon":-142.800,"zeta":-118.577,"epsilon_zeta":-24.222,"bb_type":"--","chi":-161.529,"glyco_bond":"anti","C5prime_xyz":[-1.065,8.658,0.787],"P_xyz":[1.409,8.783,1.763],"form":".","ssZp":4.599,"Dp":4.762,"splay_angle":62.365,"splay_distance":9.301,"splay_ratio":0.519,"eta":162.723,"theta":160.728,"eta_prime":-159.860,"theta_prime":-163.797,"eta_base":-142.565,"theta_base":176.233,"v0":5.756,"v1":-28.685,"v2":39.684,"v3":-37.244,"v4":19.746,"amplitude":40.355,"phase_angle":10.461,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"23p","cluster":"2a","suiteness":0.509,"filter_rmsd":0.108,"frame":{"rmsd":0.016,"origin":[72.449,47.579,28.414],"x_axis":[-0.210,-0.869,0.447],"y_axis":[-0.842,0.393,0.370],"z_axis":[-0.498,-0.299,-0.814],"quaternion":[-0.304,-0.550,0.777,0.023]}},{"index":9,"index_chain":9,"chain_name":"A","nt_resnum":9,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|9||||","linked_nts":["|1|A|U|8||||","|1|A|2MG|10||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C2'-endo,non-canonical,non-pair-contact,multiplet,junction-loop,phosphate","alpha":-69.711,"beta":-141.745,"gamma":52.257,"delta":147.772,"epsilon":-106.213,"zeta":-77.257,"epsilon_zeta":-28.955,"bb_type":"--","chi":-70.505,"glyco_bond":"anti","C5prime_xyz":[-3.511,6.939,-2.791],"P_xyz":[-1.595,8.462,-3.622],"form":".","ssZp":1.001,"Dp":1.139,"splay_angle":57.384,"splay_distance":8.983,"splay_ratio":0.491,"eta":-140.593,"theta":-38.853,"eta_prime":-159.291,"theta_prime":-112.716,"eta_base":157.148,"theta_base":-105.469,"v0":-31.651,"v1":41.775,"v2":-35.631,"v3":18.068,"v4":8.444,"amplitude":41.223,"phase_angle":149.809,"puckering":"C2'-endo","sugar_class":"~C2'-endo","bin":"32p","cluster":"1[","suiteness":0.046,"filter_rmsd":0.049,"frame":{"rmsd":0.032,"origin":[71.643,51.584,20.058],"x_axis":[0.597,-0.743,0.302],"y_axis":[-0.780,-0.452,0.432],"z_axis":[-0.185,-0.493,-0.850],"quaternion":[0.272,0.851,-0.447,0.034]}},{"index":10,"index_chain":10,"chain_name":"A","nt_resnum":10,"nt_name":"2MG","nt_code":"g","is_modified":true,"nt_id":"|1|A|2MG|10||||","linked_nts":["|1|A|A|9||||","|1|A|C|11||||"],"nt_type":"RNA","dbn":"(","summary":"modified,turn,anti,~C3'-endo,canonical,non-canonical,non-pair-contact,helix,stem-end,coaxial-stack,multiplet,junction-loop","alpha":177.814,"beta":147.203,"gamma":60.066,"delta":89.323,"epsilon":-126.196,"zeta":-88.738,"epsilon_zeta":-37.459,"bb_type":"--","chi":169.599,"glyco_bond":"anti","C5prime_xyz":[-1.474,7.923,2.327],"P_xyz":[1.163,7.613,2.505],"form":"A","ssZp":4.682,"Dp":4.635,"splay_angle":23.874,"splay_distance":3.630,"splay_ratio":0.208,"eta":27.783,"theta":-130.257,"eta_prime":97.236,"theta_prime":-130.105,"eta_base":134.838,"theta_base":-110.259,"v0":7.818,"v1":-28.008,"v2":36.712,"v3":-32.963,"v4":15.862,"amplitude":36.954,"phase_angle":6.563,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"23p","cluster":"2g","suiteness":0.640,"filter_rmsd":0.018,"frame":{"rmsd":0.018,"origin":[65.696,45.135,18.125],"x_axis":[0.690,0.714,-0.117],"y_axis":[-0.707,0.700,0.101],"z_axis":[0.154,0.013,0.988],"quaternion":[0.919,0.024,0.074,0.386]}},{"index":11,"index_chain":11,"chain_name":"A","nt_resnum":11,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|11||||","linked_nts":["|1|A|2MG|10||||","|1|A|U|12||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-56.137,"beta":167.906,"gamma":48.160,"delta":87.215,"epsilon":-150.469,"zeta":-69.893,"epsilon_zeta":-80.576,"bb_type":"BI","chi":-160.913,"glyco_bond":"anti","C5prime_xyz":[-1.242,8.684,0.656],"P_xyz":[1.349,8.741,1.166],"form":"A","ssZp":4.284,"Dp":4.455,"splay_angle":21.199,"splay_distance":3.512,"splay_ratio":0.186,"eta":170.293,"theta":-135.780,"eta_prime":-175.735,"theta_prime":-136.731,"eta_base":-137.774,"theta_base":-119.859,"v0":1.198,"v1":-21.206,"v2":32.093,"v3":-32.468,"v4":19.801,"amplitude":33.528,"phase_angle":16.824,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.507,"filter_rmsd":0.065,"frame":{"rmsd":0.005,"origin":[67.683,44.297,21.045],"x_axis":[0.075,0.996,-0.054],"y_axis":[-0.977,0.084,0.195],"z_axis":[0.199,0.038,0.979],"quaternion":[0.731,0.054,0.086,0.675]}},{"index":12,"index_chain":12,"chain_name":"A","nt_resnum":12,"nt_name":"U","nt_code":"U","nt_id":"|1|A|U|12||||","linked_nts":["|1|A|C|11||||","|1|A|C|13||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack,multiplet","alpha":-67.796,"beta":172.869,"gamma":51.821,"delta":80.665,"epsilon":-158.532,"zeta":-65.168,"epsilon_zeta":-93.364,"bb_type":"BI","chi":-158.254,"glyco_bond":"anti","C5prime_xyz":[-1.826,8.884,0.309],"P_xyz":[0.668,9.659,0.581],"form":".","ssZp":4.289,"Dp":4.451,"splay_angle":21.008,"splay_distance":3.999,"splay_ratio":0.203,"eta":159.921,"theta":-121.627,"eta_prime":176.532,"theta_prime":-130.551,"eta_base":-148.472,"theta_base":-101.379,"v0":-4.568,"v1":-19.276,"v2":34.458,"v3":-37.904,"v4":26.702,"amplitude":38.082,"phase_angle":25.197,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.898,"filter_rmsd":0.107,"frame":{"rmsd":0.012,"origin":[69.730,44.746,23.862],"x_axis":[-0.416,0.901,-0.123],"y_axis":[-0.889,-0.375,0.263],"z_axis":[0.190,0.219,0.957],"quaternion":[0.540,0.020,0.145,0.829]}},{"index":13,"index_chain":13,"chain_name":"A","nt_resnum":13,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|13||||","linked_nts":["|1|A|U|12||||","|1|A|A|14||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem-end,coaxial-stack,multiplet,hairpin-loop,kissing-loop","alpha":166.574,"beta":-169.891,"gamma":178.570,"delta":82.512,"epsilon":-153.131,"zeta":-97.390,"epsilon_zeta":-55.741,"bb_type":"BI","chi":-168.327,"glyco_bond":"anti","C5prime_xyz":[-1.665,8.859,0.946],"P_xyz":[-0.427,10.730,-0.457],"form":".","ssZp":4.279,"Dp":4.362,"splay_angle":31.589,"splay_distance":5.608,"splay_ratio":0.283,"eta":178.054,"theta":-179.093,"eta_prime":-166.774,"theta_prime":176.682,"eta_base":-118.460,"theta_base":178.449,"v0":-3.387,"v1":-19.415,"v2":33.754,"v3":-36.433,"v4":25.110,"amplitude":36.852,"phase_angle":23.659,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33t","cluster":"1c","suiteness":0.824,"filter_rmsd":0.065,"frame":{"rmsd":0.013,"origin":[70.576,48.293,25.505],"x_axis":[-0.820,0.572,0.020],"y_axis":[-0.494,-0.725,0.481],"z_axis":[0.289,0.384,0.877],"quaternion":[0.288,0.083,0.234,0.925]}},{"index":14,"index_chain":14,"chain_name":"A","nt_resnum":14,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|14||||","linked_nts":["|1|A|C|13||||","|1|A|G|15||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C3'-endo,non-canonical,non-pair-contact,helix,multiplet,hairpin-loop,kissing-loop","alpha":83.353,"beta":-158.279,"gamma":-114.591,"delta":92.038,"epsilon":-125.519,"zeta":-57.251,"epsilon_zeta":-68.268,"bb_type":"--","chi":-170.736,"glyco_bond":"anti","C5prime_xyz":[-1.173,8.154,1.353],"P_xyz":[-0.277,10.595,1.509],"form":".","ssZp":4.669,"Dp":4.736,"splay_angle":38.010,"splay_distance":5.874,"splay_ratio":0.327,"eta":171.878,"theta":-146.540,"eta_prime":172.076,"theta_prime":-133.428,"eta_base":-179.688,"theta_base":-74.610,"v0":12.581,"v1":-30.814,"v2":36.785,"v3":-30.218,"v4":11.032,"amplitude":36.792,"phase_angle":358.915,"puckering":"C2'-exo","sugar_class":"~C3'-endo","bin":"trig","cluster":"!!","suiteness":0.000,"filter_rmsd":0.040,"frame":{"rmsd":0.025,"origin":[75.495,50.655,26.800],"x_axis":[-0.849,0.520,0.091],"y_axis":[-0.441,-0.793,0.420],"z_axis":[0.291,0.316,0.903],"quaternion":[0.255,0.101,0.195,0.942]}},{"index":15,"index_chain":15,"chain_name":"A","nt_resnum":15,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|15||||","linked_nts":["|1|A|A|14||||","|1|A|H2U|16||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C3'-endo,non-canonical,non-pair-contact,helix,hairpin-loop,kissing-loop","alpha":-55.064,"beta":162.460,"gamma":51.892,"delta":79.826,"epsilon":-136.303,"zeta":-143.947,"epsilon_zeta":7.644,"bb_type":"--","chi":-164.510,"glyco_bond":"anti","C5prime_xyz":[-1.157,8.725,0.969],"P_xyz":[1.445,9.104,0.747],"form":".","ssZp":4.721,"Dp":4.744,"splay_angle":26.169,"splay_distance":4.119,"splay_ratio":0.262,"eta":164.270,"theta":-177.877,"eta_prime":-166.643,"theta_prime":-160.973,"eta_base":-92.626,"theta_base":-101.783,"v0":1.924,"v1":-24.605,"v2":36.808,"v3":-36.771,"v4":22.238,"amplitude":38.291,"phase_angle":15.998,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.484,"filter_rmsd":0.021,"frame":{"rmsd":0.021,"origin":[71.768,52.718,30.844],"x_axis":[-0.738,-0.485,0.469],"y_axis":[0.609,-0.778,0.152],"z_axis":[0.291,0.398,0.870],"quaternion":[-0.297,0.206,0.150,0.920]}},{"index":16,"index_chain":16,"chain_name":"A","nt_resnum":16,"nt_name":"H2U","nt_code":"u","is_modified":true,"nt_id":"|1|A|H2U|16||||","linked_nts":["|1|A|G|15||||","|1|A|H2U|17||||"],"nt_type":"RNA","dbn":".","summary":"modified,anti,~C3'-endo,non-canonical,non-pair-contact,helix-end,hairpin-loop,kissing-loop,cap-donor,cap-acceptor,phosphate,splayed-apart","alpha":-6.131,"beta":91.184,"gamma":76.836,"delta":96.826,"epsilon":-61.796,"zeta":-131.179,"epsilon_zeta":69.382,"bb_type":"--","chi":-85.761,"glyco_bond":"anti","C5prime_xyz":[-2.226,7.728,-2.567],"P_xyz":[-0.598,5.850,-3.448],"form":".","ssZp":-0.713,"Dp":3.376,"splay_angle":145.773,"splay_distance":19.493,"splay_ratio":0.956,"eta":-124.095,"theta":-77.467,"eta_prime":-114.243,"theta_prime":-108.253,"eta_base":-72.504,"theta_base":-127.025,"v0":0.014,"v1":-18.690,"v2":29.239,"v3":-30.192,"v4":19.150,"amplitude":30.887,"phase_angle":18.802,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"trig","cluster":"!!","suiteness":0.000,"filter_rmsd":0.205,"frame":{"rmsd":0.188,"origin":[72.770,52.414,34.828],"x_axis":[-0.210,-0.188,0.960],"y_axis":[0.964,0.127,0.235],"z_axis":[-0.166,0.974,0.154],"quaternion":[0.518,-0.357,-0.544,-0.556]}},{"index":17,"index_chain":17,"chain_name":"A","nt_resnum":17,"nt_name":"H2U","nt_code":"u","is_modified":true,"nt_id":"|1|A|H2U|17||||","linked_nts":["|1|A|H2U|16||||","|1|A|G|18||||"],"nt_type":"RNA","dbn":".","summary":"modified,turn,anti,~C3'-endo,non-stack,non-pair-contact,hairpin-loop,kissing-loop,splayed-apart","alpha":27.788,"beta":107.741,"gamma":174.111,"delta":94.752,"epsilon":177.959,"zeta":76.191,"epsilon_zeta":101.768,"bb_type":"--","chi":-142.494,"glyco_bond":"anti","C5prime_xyz":[-0.276,8.004,-0.824],"P_xyz":[1.587,9.241,-2.184],"form":".","ssZp":-0.904,"Dp":4.204,"splay_angle":105.552,"splay_distance":15.773,"splay_ratio":0.796,"eta":-10.538,"theta":-64.299,"eta_prime":7.717,"theta_prime":-94.710,"eta_base":17.271,"theta_base":-125.375,"v0":23.033,"v1":-36.731,"v2":35.115,"v3":-23.215,"v4":0.247,"amplitude":37.043,"phase_angle":341.433,"puckering":"C2'-exo","sugar_class":"~C3'-endo","bin":"33t","cluster":"!!","suiteness":0.000,"filter_rmsd":0.226,"frame":{"rmsd":0.201,"origin":[91.069,59.089,35.589],"x_axis":[0.297,-0.373,-0.879],"y_axis":[-0.933,-0.312,-0.182],"z_axis":[-0.206,0.874,-0.440],"quaternion":[-0.369,0.716,-0.456,-0.379]}},{"index":18,"index_chain":18,"chain_name":"A","nt_resnum":18,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|18||||","linked_nts":["|1|A|H2U|17||||","|1|A|G|19||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C2'-endo,BII,non-canonical,non-pair-contact,helix,hairpin-loop,kissing-loop,phosphate,splayed-apart","alpha":45.383,"beta":-159.437,"gamma":59.039,"delta":150.600,"epsilon":-95.226,"zeta":-179.094,"epsilon_zeta":83.868,"bb_type":"BII","chi":-99.543,"glyco_bond":"anti","C5prime_xyz":[-3.063,8.183,-1.679],"P_xyz":[-0.929,9.709,-1.530],"form":".","ssZp":1.595,"Dp":1.092,"splay_angle":51.638,"splay_distance":8.029,"splay_ratio":0.441,"eta":-21.039,"theta":-167.377,"eta_prime":45.321,"theta_prime":-160.918,"eta_base":61.258,"theta_base":-124.215,"v0":-27.863,"v1":39.482,"v2":-35.037,"v3":20.160,"v4":4.814,"amplitude":38.898,"phase_angle":154.256,"puckering":"C2'-endo","sugar_class":"~C2'-endo","bin":"32p","cluster":"5p","suiteness":0.026,"filter_rmsd":0.028,"frame":{"rmsd":0.028,"origin":[77.478,66.364,38.927],"x_axis":[0.235,0.206,0.950],"y_axis":[0.590,-0.807,0.029],"z_axis":[0.773,0.553,-0.311],"quaternion":[-0.171,0.767,0.259,0.562]}},{"index":19,"index_chain":19,"chain_name":"A","nt_resnum":19,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|19||||","linked_nts":["|1|A|G|18||||","|1|A|G|20||||"],"nt_type":"RNA","dbn":"[","summary":"pseudoknotted,anti,~C2'-endo,isolated-canonical,non-pair-contact,helix-end,hairpin-loop,kissing-loop,phosphate,splayed-apart","alpha":-71.420,"beta":-178.863,"gamma":53.824,"delta":153.803,"epsilon":-91.620,"zeta":-83.735,"epsilon_zeta":-7.886,"bb_type":"--","chi":-80.330,"glyco_bond":"anti","C5prime_xyz":[-2.093,6.990,-3.162],"P_xyz":[0.428,7.796,-3.116],"form":".","ssZp":-1.144,"Dp":0.485,"splay_angle":130.296,"splay_distance":16.774,"splay_ratio":0.908,"eta":-127.384,"theta":-43.260,"eta_prime":-121.962,"theta_prime":-72.926,"eta_base":-105.803,"theta_base":-7.797,"v0":-17.575,"v1":30.963,"v2":-31.947,"v3":23.070,"v4":-3.813,"amplitude":32.712,"phase_angle":167.579,"puckering":"C2'-endo","sugar_class":"~C2'-endo","bin":"22p","cluster":"4b","suiteness":0.512,"filter_rmsd":0.026,"frame":{"rmsd":0.026,"origin":[83.700,68.003,34.124],"x_axis":[0.635,-0.321,0.702],"y_axis":[0.018,-0.903,-0.429],"z_axis":[0.772,0.285,-0.568],"quaternion":[-0.202,0.881,-0.086,0.418]}},{"index":20,"index_chain":20,"chain_name":"A","nt_resnum":20,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|20||||","linked_nts":["|1|A|G|19||||","|1|A|A|21||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C3'-endo,non-stack,non-pair-contact,hairpin-loop,kissing-loop,splayed-apart","alpha":-81.332,"beta":-150.736,"gamma":47.756,"delta":89.936,"epsilon":-122.273,"zeta":-54.104,"epsilon_zeta":-68.169,"bb_type":"--","chi":177.784,"glyco_bond":"anti","C5prime_xyz":[-1.293,8.106,1.859],"P_xyz":[0.918,7.705,3.220],"form":".","ssZp":4.898,"Dp":4.762,"splay_angle":57.042,"splay_distance":9.595,"splay_ratio":0.491,"eta":165.332,"theta":-100.379,"eta_prime":-160.424,"theta_prime":-101.131,"eta_base":-177.896,"theta_base":-115.439,"v0":6.569,"v1":-27.794,"v2":36.588,"v3":-34.198,"v4":17.489,"amplitude":37.018,"phase_angle":8.746,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"23p","cluster":"2a","suiteness":0.623,"filter_rmsd":0.018,"frame":{"rmsd":0.018,"origin":[78.526,53.914,26.633],"x_axis":[0.020,0.044,0.999],"y_axis":[0.458,0.888,-0.048],"z_axis":[-0.889,0.458,-0.003],"quaternion":[0.690,-0.184,-0.684,-0.150]}},{"index":21,"index_chain":21,"chain_name":"A","nt_resnum":21,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|21||||","linked_nts":["|1|A|G|20||||","|1|A|G|22||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C3'-endo,BI,non-canonical,non-pair-contact,multiplet,hairpin-loop,kissing-loop","alpha":-75.551,"beta":148.565,"gamma":-176.602,"delta":78.228,"epsilon":-168.936,"zeta":-75.552,"epsilon_zeta":-93.384,"bb_type":"BI","chi":-160.212,"glyco_bond":"anti","C5prime_xyz":[-1.421,8.757,0.543],"P_xyz":[-1.051,10.961,-0.808],"form":".","ssZp":4.004,"Dp":4.260,"splay_angle":40.663,"splay_distance":7.005,"splay_ratio":0.352,"eta":-78.308,"theta":152.701,"eta_prime":-67.981,"theta_prime":155.141,"eta_base":-61.113,"theta_base":154.775,"v0":3.807,"v1":-25.001,"v2":35.068,"v3":-34.374,"v4":19.377,"amplitude":35.992,"phase_angle":13.013,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33t","cluster":"!!","suiteness":0.000,"filter_rmsd":0.044,"frame":{"rmsd":0.018,"origin":[68.966,54.737,26.636],"x_axis":[-0.747,0.646,-0.154],"y_axis":[0.646,0.654,-0.394],"z_axis":[-0.154,-0.394,-0.906],"quaternion":[-0.000,0.355,0.909,-0.217]}},{"index":22,"index_chain":22,"chain_name":"A","nt_resnum":22,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|22||||","linked_nts":["|1|A|A|21||||","|1|A|A|23||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-canonical,non-pair-contact,helix,stem-end,coaxial-stack,multiplet,hairpin-loop,kissing-loop","alpha":158.774,"beta":153.494,"gamma":179.253,"delta":81.999,"epsilon":-144.965,"zeta":-80.445,"epsilon_zeta":-64.520,"bb_type":"BI","chi":-175.514,"glyco_bond":"anti","C5prime_xyz":[-1.184,8.180,1.571],"P_xyz":[-0.135,10.493,0.932],"form":"A","ssZp":4.602,"Dp":4.726,"splay_angle":25.621,"splay_distance":3.898,"splay_ratio":0.224,"eta":159.497,"theta":167.616,"eta_prime":156.614,"theta_prime":178.778,"eta_base":157.084,"theta_base":-162.605,"v0":16.379,"v1":-34.107,"v2":38.125,"v3":-29.540,"v4":8.271,"amplitude":38.347,"phase_angle":353.835,"puckering":"C2'-exo","sugar_class":"~C3'-endo","bin":"33t","cluster":"1f","suiteness":0.714,"filter_rmsd":0.017,"frame":{"rmsd":0.017,"origin":[70.705,48.038,25.558],"x_axis":[-0.810,0.585,0.035],"y_axis":[0.528,0.755,-0.388],"z_axis":[-0.253,-0.296,-0.921],"quaternion":[-0.077,0.298,0.934,-0.183]}},{"index":23,"index_chain":23,"chain_name":"A","nt_resnum":23,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|23||||","linked_nts":["|1|A|G|22||||","|1|A|G|24||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-canonical,non-pair-contact,helix,stem,coaxial-stack,multiplet,phosphate","alpha":-53.308,"beta":174.758,"gamma":52.482,"delta":82.300,"epsilon":-155.347,"zeta":-66.440,"epsilon_zeta":-88.907,"bb_type":"BI","chi":-158.028,"glyco_bond":"anti","C5prime_xyz":[-1.081,8.642,0.380],"P_xyz":[1.500,8.814,0.802],"form":"A","ssZp":4.181,"Dp":4.609,"splay_angle":22.960,"splay_distance":3.591,"splay_ratio":0.199,"eta":178.355,"theta":-141.828,"eta_prime":-173.493,"theta_prime":-141.172,"eta_base":-156.109,"theta_base":-112.049,"v0":4.190,"v1":-26.625,"v2":37.423,"v3":-36.468,"v4":20.141,"amplitude":38.350,"phase_angle":12.624,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.840,"filter_rmsd":0.048,"frame":{"rmsd":0.030,"origin":[69.604,44.810,23.670],"x_axis":[-0.522,0.839,-0.155],"y_axis":[0.794,0.411,-0.448],"z_axis":[-0.312,-0.357,-0.881],"quaternion":[-0.047,0.487,0.839,-0.240]}},{"index":24,"index_chain":24,"chain_name":"A","nt_resnum":24,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|24||||","linked_nts":["|1|A|A|23||||","|1|A|C|25||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-68.767,"beta":178.230,"gamma":46.822,"delta":83.604,"epsilon":-144.254,"zeta":-72.825,"epsilon_zeta":-71.429,"bb_type":"BI","chi":-160.675,"glyco_bond":"anti","C5prime_xyz":[-1.209,8.664,0.668],"P_xyz":[1.340,8.941,0.770],"form":"A","ssZp":4.629,"Dp":4.742,"splay_angle":20.512,"splay_distance":3.282,"splay_ratio":0.181,"eta":163.726,"theta":-139.477,"eta_prime":177.699,"theta_prime":-137.575,"eta_base":-137.561,"theta_base":-103.832,"v0":3.914,"v1":-28.372,"v2":40.335,"v3":-39.338,"v4":22.414,"amplitude":41.456,"phase_angle":13.353,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.881,"filter_rmsd":0.013,"frame":{"rmsd":0.013,"origin":[67.430,44.046,20.915],"x_axis":[0.033,0.938,-0.344],"y_axis":[0.947,-0.139,-0.291],"z_axis":[-0.321,-0.316,-0.893],"quaternion":[0.009,0.719,0.656,-0.231]}},{"index":25,"index_chain":25,"chain_name":"A","nt_resnum":25,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|25||||","linked_nts":["|1|A|G|24||||","|1|A|M2G|26||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem-end,coaxial-stack,multiplet,junction-loop","alpha":-65.087,"beta":168.872,"gamma":53.883,"delta":83.255,"epsilon":-145.086,"zeta":-68.361,"epsilon_zeta":-76.725,"bb_type":"BI","chi":-160.263,"glyco_bond":"anti","C5prime_xyz":[-1.404,8.812,0.504],"P_xyz":[1.159,9.293,0.176],"form":".","ssZp":4.560,"Dp":4.698,"splay_angle":30.697,"splay_distance":4.747,"splay_ratio":0.266,"eta":161.446,"theta":-132.612,"eta_prime":179.238,"theta_prime":-131.039,"eta_base":-128.211,"theta_base":-88.995,"v0":0.624,"v1":-24.542,"v2":37.827,"v3":-38.029,"v4":23.615,"amplitude":39.640,"phase_angle":17.398,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.967,"filter_rmsd":0.064,"frame":{"rmsd":0.011,"origin":[65.807,45.344,18.375],"x_axis":[0.618,0.716,-0.324],"y_axis":[0.668,-0.696,-0.263],"z_axis":[-0.414,-0.054,-0.909],"quaternion":[-0.058,0.898,0.386,-0.206]}},{"index":26,"index_chain":26,"chain_name":"A","nt_resnum":26,"nt_name":"M2G","nt_code":"g","is_modified":true,"nt_id":"|1|A|M2G|26||||","linked_nts":["|1|A|C|25||||","|1|A|C|27||||"],"nt_type":"RNA","dbn":".","summary":"modified,anti,~C3'-endo,BI,non-canonical,non-pair-contact,helix,junction-loop","alpha":-53.808,"beta":170.843,"gamma":47.747,"delta":85.971,"epsilon":-136.277,"zeta":-76.875,"epsilon_zeta":-59.402,"bb_type":"BI","chi":-163.385,"glyco_bond":"anti","C5prime_xyz":[-1.396,8.639,0.856],"P_xyz":[1.184,9.009,1.086],"form":"A","ssZp":4.569,"Dp":4.670,"splay_angle":27.362,"splay_distance":4.345,"splay_ratio":0.238,"eta":173.011,"theta":-133.040,"eta_prime":-167.660,"theta_prime":-130.394,"eta_base":-106.945,"theta_base":-93.576,"v0":6.305,"v1":-27.540,"v2":37.061,"v3":-34.703,"v4":17.860,"amplitude":37.556,"phase_angle":9.320,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.819,"filter_rmsd":0.013,"frame":{"rmsd":0.013,"origin":[66.934,47.644,14.379],"x_axis":[0.971,-0.059,-0.230],"y_axis":[-0.060,-0.998,0.003],"z_axis":[-0.230,0.011,-0.973],"quaternion":[-0.002,0.993,-0.030,-0.116]}},{"index":27,"index_chain":27,"chain_name":"A","nt_resnum":27,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|27||||","linked_nts":["|1|A|M2G|26||||","|1|A|C|28||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem-end,coaxial-stack,junction-loop","alpha":-52.975,"beta":166.853,"gamma":43.623,"delta":83.427,"epsilon":-148.537,"zeta":-73.433,"epsilon_zeta":-75.104,"bb_type":"BI","chi":-168.186,"glyco_bond":"anti","C5prime_xyz":[-1.477,8.758,0.917],"P_xyz":[1.035,9.194,1.487],"form":"A","ssZp":4.527,"Dp":4.616,"splay_angle":23.068,"splay_distance":3.606,"splay_ratio":0.201,"eta":163.510,"theta":-142.334,"eta_prime":-178.029,"theta_prime":-141.546,"eta_base":-123.567,"theta_base":-105.554,"v0":0.151,"v1":-23.483,"v2":36.491,"v3":-37.201,"v4":23.580,"amplitude":38.435,"phase_angle":18.302,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.698,"filter_rmsd":0.066,"frame":{"rmsd":0.011,"origin":[68.789,47.964,10.462],"x_axis":[0.686,-0.700,0.198],"y_axis":[-0.727,-0.671,0.146],"z_axis":[0.030,-0.244,-0.969],"quaternion":[0.107,0.912,-0.391,0.063]}},{"index":28,"index_chain":28,"chain_name":"A","nt_resnum":28,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|28||||","linked_nts":["|1|A|C|27||||","|1|A|A|29||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-72.439,"beta":178.326,"gamma":49.309,"delta":80.115,"epsilon":-152.098,"zeta":-66.986,"epsilon_zeta":-85.112,"bb_type":"BI","chi":-160.619,"glyco_bond":"anti","C5prime_xyz":[-1.065,8.709,0.551],"P_xyz":[1.539,8.981,0.696],"form":"A","ssZp":4.555,"Dp":4.727,"splay_angle":21.612,"splay_distance":3.483,"splay_ratio":0.193,"eta":157.523,"theta":-143.845,"eta_prime":171.116,"theta_prime":-144.302,"eta_base":-136.309,"theta_base":-125.530,"v0":6.624,"v1":-28.983,"v2":39.090,"v3":-36.285,"v4":18.835,"amplitude":39.600,"phase_angle":9.212,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.923,"filter_rmsd":0.065,"frame":{"rmsd":0.007,"origin":[70.501,46.828,7.499],"x_axis":[0.022,-0.931,0.363],"y_axis":[-0.992,-0.066,-0.110],"z_axis":[0.126,-0.358,-0.925],"quaternion":[0.087,0.709,-0.678,0.172]}},{"index":29,"index_chain":29,"chain_name":"A","nt_resnum":29,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|29||||","linked_nts":["|1|A|C|28||||","|1|A|G|30||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-66.553,"beta":173.956,"gamma":55.560,"delta":81.361,"epsilon":-155.521,"zeta":-78.260,"epsilon_zeta":-77.261,"bb_type":"BI","chi":-165.873,"glyco_bond":"anti","C5prime_xyz":[-1.448,8.667,0.923],"P_xyz":[1.122,9.338,0.866],"form":"A","ssZp":4.727,"Dp":4.649,"splay_angle":26.957,"splay_distance":4.141,"splay_ratio":0.238,"eta":163.471,"theta":-152.885,"eta_prime":179.014,"theta_prime":-150.826,"eta_base":-142.944,"theta_base":-124.676,"v0":3.385,"v1":-26.593,"v2":38.367,"v3":-37.381,"v4":21.364,"amplitude":39.489,"phase_angle":13.692,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.973,"filter_rmsd":0.041,"frame":{"rmsd":0.019,"origin":[72.649,45.057,5.406],"x_axis":[-0.457,-0.812,0.364],"y_axis":[-0.873,0.330,-0.359],"z_axis":[0.172,-0.482,-0.859],"quaternion":[-0.059,-0.518,0.813,-0.259]}},{"index":30,"index_chain":30,"chain_name":"A","nt_resnum":30,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|30||||","linked_nts":["|1|A|A|29||||","|1|A|A|31||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem-end,coaxial-stack,hairpin-loop","alpha":-53.966,"beta":165.929,"gamma":56.930,"delta":83.563,"epsilon":-144.716,"zeta":-62.268,"epsilon_zeta":-82.448,"bb_type":"BI","chi":-171.748,"glyco_bond":"anti","C5prime_xyz":[-1.468,8.615,1.285],"P_xyz":[1.180,8.925,1.504],"form":".","ssZp":4.673,"Dp":4.653,"splay_angle":25.716,"splay_distance":3.933,"splay_ratio":0.223,"eta":178.261,"theta":-127.836,"eta_prime":-167.673,"theta_prime":-126.479,"eta_base":-128.182,"theta_base":-72.525,"v0":2.644,"v1":-24.180,"v2":35.695,"v3":-34.934,"v4":20.391,"amplitude":36.876,"phase_angle":14.544,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.838,"filter_rmsd":0.013,"frame":{"rmsd":0.013,"origin":[74.315,41.759,3.537],"x_axis":[-0.862,-0.489,0.133],"y_axis":[-0.488,0.731,-0.478],"z_axis":[0.137,-0.477,-0.868],"quaternion":[0.001,-0.263,0.930,-0.256]}},{"index":31,"index_chain":31,"chain_name":"A","nt_resnum":31,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|31||||","linked_nts":["|1|A|G|30||||","|1|A|OMC|32||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C3'-endo,BI,non-canonical,non-pair-contact,helix,hairpin-loop","alpha":-69.947,"beta":177.767,"gamma":52.310,"delta":83.748,"epsilon":-136.979,"zeta":-75.532,"epsilon_zeta":-61.447,"bb_type":"BI","chi":-156.701,"glyco_bond":"anti","C5prime_xyz":[-1.122,8.649,0.257],"P_xyz":[1.488,8.826,0.453],"form":"A","ssZp":4.243,"Dp":4.718,"splay_angle":21.521,"splay_distance":3.462,"splay_ratio":0.187,"eta":165.426,"theta":-133.890,"eta_prime":-174.330,"theta_prime":-131.034,"eta_base":-100.969,"theta_base":-93.855,"v0":2.627,"v1":-23.996,"v2":35.008,"v3":-34.560,"v4":20.228,"amplitude":36.185,"phase_angle":14.649,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.914,"filter_rmsd":0.036,"frame":{"rmsd":0.007,"origin":[71.929,39.378,1.510],"x_axis":[-0.895,0.331,-0.298],"y_axis":[0.444,0.713,-0.542],"z_axis":[0.033,-0.618,-0.786],"quaternion":[0.090,0.210,0.921,-0.315]}},{"index":32,"index_chain":32,"chain_name":"A","nt_resnum":32,"nt_name":"OMC","nt_code":"c","is_modified":true,"nt_id":"|1|A|OMC|32||||","linked_nts":["|1|A|A|31||||","|1|A|U|33||||"],"nt_type":"RNA","dbn":".","summary":"modified,anti,~C3'-endo,BI,non-canonical,non-pair-contact,helix,hairpin-loop","alpha":-52.715,"beta":161.380,"gamma":49.252,"delta":80.097,"epsilon":-145.941,"zeta":-71.172,"epsilon_zeta":-74.769,"bb_type":"BI","chi":-149.859,"glyco_bond":"anti","C5prime_xyz":[-1.412,8.895,-0.053],"P_xyz":[1.163,9.273,-0.366],"form":"A","ssZp":4.157,"Dp":4.625,"splay_angle":25.942,"splay_distance":4.191,"splay_ratio":0.224,"eta":164.504,"theta":-139.227,"eta_prime":-175.912,"theta_prime":-137.976,"eta_base":-122.296,"theta_base":-108.946,"v0":-1.228,"v1":-21.697,"v2":35.099,"v3":-36.719,"v4":23.893,"amplitude":37.444,"phase_angle":20.386,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.782,"filter_rmsd":0.063,"frame":{"rmsd":0.008,"origin":[69.961,38.256,-1.108],"x_axis":[-0.430,0.779,-0.456],"y_axis":[0.873,0.231,-0.429],"z_axis":[-0.229,-0.583,-0.780],"quaternion":[0.073,0.529,0.781,-0.324]}},{"index":33,"index_chain":33,"chain_name":"A","nt_resnum":33,"nt_name":"U","nt_code":"U","nt_id":"|1|A|U|33||||","linked_nts":["|1|A|OMC|32||||","|1|A|OMG|34||||"],"nt_type":"RNA","dbn":".","summary":"u-turn,anti,~C3'-endo,BI,non-canonical,non-pair-contact,helix-end,hairpin-loop,cap-acceptor","alpha":-67.688,"beta":-177.012,"gamma":47.001,"delta":82.123,"epsilon":-148.003,"zeta":-53.686,"epsilon_zeta":-94.317,"bb_type":"BI","chi":-148.167,"glyco_bond":"anti","C5prime_xyz":[-1.341,8.794,-0.053],"P_xyz":[1.245,9.278,0.105],"form":".","ssZp":4.193,"Dp":4.642,"splay_angle":75.467,"splay_distance":11.001,"splay_ratio":0.612,"eta":165.072,"theta":-113.969,"eta_prime":177.822,"theta_prime":-158.522,"eta_base":-141.114,"theta_base":138.329,"v0":3.451,"v1":-25.441,"v2":36.453,"v3":-35.322,"v4":20.145,"amplitude":37.462,"phase_angle":13.327,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.897,"filter_rmsd":0.105,"frame":{"rmsd":0.014,"origin":[68.021,37.859,-4.801],"x_axis":[0.285,0.930,-0.231],"y_axis":[0.929,-0.327,-0.172],"z_axis":[-0.235,-0.166,-0.958],"quaternion":[-0.002,0.802,0.580,-0.146]}},{"index":34,"index_chain":34,"chain_name":"A","nt_resnum":34,"nt_name":"OMG","nt_code":"g","is_modified":true,"nt_id":"|1|A|OMG|34||||","linked_nts":["|1|A|U|33||||","|1|A|A|35||||"],"nt_type":"RNA","dbn":".","summary":"modified,turn,u-turn,anti,~C3'-endo,BI,non-pair-contact,hairpin-loop","alpha":171.113,"beta":148.145,"gamma":52.546,"delta":83.450,"epsilon":-132.519,"zeta":-71.830,"epsilon_zeta":-60.690,"bb_type":"BI","chi":-171.227,"glyco_bond":"anti","C5prime_xyz":[-1.632,8.633,1.060],"P_xyz":[0.974,8.537,1.594],"form":".","ssZp":4.152,"Dp":4.577,"splay_angle":22.095,"splay_distance":3.600,"splay_ratio":0.192,"eta":27.334,"theta":-121.664,"eta_prime":50.470,"theta_prime":-123.701,"eta_base":22.732,"theta_base":-84.393,"v0":3.923,"v1":-22.676,"v2":32.176,"v3":-30.809,"v4":17.115,"amplitude":32.913,"phase_angle":12.153,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1g","suiteness":0.784,"filter_rmsd":0.021,"frame":{"rmsd":0.021,"origin":[67.629,27.052,-6.820],"x_axis":[0.783,-0.526,0.333],"y_axis":[0.618,0.590,-0.520],"z_axis":[0.077,0.612,0.787],"quaternion":[0.889,-0.318,-0.072,-0.322]}},{"index":35,"index_chain":35,"chain_name":"A","nt_resnum":35,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|35||||","linked_nts":["|1|A|OMG|34||||","|1|A|A|36||||"],"nt_type":"RNA","dbn":".","summary":"u-turn,anti,~C3'-endo,BI,non-pair-contact,hairpin-loop,cap-donor,phosphate","alpha":-47.663,"beta":163.713,"gamma":40.211,"delta":80.882,"epsilon":-143.671,"zeta":-59.500,"epsilon_zeta":-84.171,"bb_type":"BI","chi":-154.386,"glyco_bond":"anti","C5prime_xyz":[-1.567,8.808,0.184],"P_xyz":[0.981,9.434,0.510],"form":".","ssZp":4.200,"Dp":4.544,"splay_angle":20.568,"splay_distance":3.869,"splay_ratio":0.193,"eta":162.512,"theta":-127.745,"eta_prime":-177.722,"theta_prime":-128.467,"eta_base":-116.817,"theta_base":-113.376,"v0":-1.977,"v1":-19.858,"v2":32.697,"v3":-34.910,"v4":23.371,"amplitude":35.233,"phase_angle":21.874,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.517,"filter_rmsd":0.037,"frame":{"rmsd":0.006,"origin":[69.162,27.866,-3.666],"x_axis":[0.988,0.010,-0.156],"y_axis":[-0.096,0.826,-0.555],"z_axis":[0.124,0.563,0.817],"quaternion":[0.953,-0.293,0.073,0.028]}},{"index":36,"index_chain":36,"chain_name":"A","nt_resnum":36,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|36||||","linked_nts":["|1|A|A|35||||","|1|A|YYG|37||||"],"nt_type":"RNA","dbn":".","summary":"u-turn,anti,~C3'-endo,BI,non-canonical,non-pair-contact,helix-end,hairpin-loop,phosphate","alpha":-52.433,"beta":165.690,"gamma":51.257,"delta":72.220,"epsilon":-160.374,"zeta":-85.207,"epsilon_zeta":-75.167,"bb_type":"BI","chi":-158.398,"glyco_bond":"anti","C5prime_xyz":[-2.992,8.889,0.312],"P_xyz":[-1.139,10.719,0.240],"form":".","ssZp":4.490,"Dp":4.311,"splay_angle":24.484,"splay_distance":3.845,"splay_ratio":0.212,"eta":164.941,"theta":-172.657,"eta_prime":-174.399,"theta_prime":-169.193,"eta_base":-142.328,"theta_base":-115.098,"v0":-20.623,"v1":-7.306,"v2":30.603,"v3":-43.207,"v4":40.469,"amplitude":43.929,"phase_angle":45.841,"puckering":"C4'-exo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.670,"filter_rmsd":0.040,"frame":{"rmsd":0.015,"origin":[71.451,27.985,-0.550],"x_axis":[0.858,0.203,-0.472],"y_axis":[-0.414,0.818,-0.400],"z_axis":[0.305,0.539,0.785],"quaternion":[0.930,-0.252,0.209,0.166]}},{"index":37,"index_chain":37,"chain_name":"A","nt_resnum":37,"nt_name":"YYG","nt_code":"g","is_modified":true,"nt_id":"|1|A|YYG|37||||","linked_nts":["|1|A|A|36||||","|1|A|A|38||||"],"nt_type":"RNA","dbn":".","summary":"modified,anti,~C3'-endo,BI,non-pair-contact,hairpin-loop","alpha":-57.536,"beta":162.974,"gamma":47.831,"delta":81.127,"epsilon":-148.148,"zeta":-67.046,"epsilon_zeta":-81.102,"bb_type":"BI","chi":-168.845,"glyco_bond":"anti","C5prime_xyz":[-1.323,8.680,1.082],"P_xyz":[1.301,8.850,1.401],"form":".","ssZp":4.631,"Dp":4.650,"splay_angle":32.084,"splay_distance":4.652,"splay_ratio":0.277,"eta":163.123,"theta":-135.171,"eta_prime":174.149,"theta_prime":-131.315,"eta_base":-119.809,"theta_base":-79.790,"v0":2.100,"v1":-24.085,"v2":36.046,"v3":-35.620,"v4":21.023,"amplitude":37.380,"phase_angle":15.352,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.625,"filter_rmsd":0.015,"frame":{"rmsd":0.015,"origin":[74.148,30.103,1.189],"x_axis":[0.227,0.637,-0.736],"y_axis":[-0.910,0.408,0.072],"z_axis":[0.347,0.654,0.673],"quaternion":[0.760,-0.191,0.356,0.509]}},{"index":38,"index_chain":38,"chain_name":"A","nt_resnum":38,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|38||||","linked_nts":["|1|A|YYG|37||||","|1|A|PSU|39||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C3'-endo,BI,non-canonical,non-pair-contact,helix,hairpin-loop","alpha":-61.808,"beta":-179.981,"gamma":46.930,"delta":82.458,"epsilon":-136.769,"zeta":-76.362,"epsilon_zeta":-60.408,"bb_type":"BI","chi":-169.360,"glyco_bond":"anti","C5prime_xyz":[-0.802,8.255,1.137],"P_xyz":[1.723,7.834,1.736],"form":"A","ssZp":4.633,"Dp":4.779,"splay_angle":23.749,"splay_distance":3.681,"splay_ratio":0.209,"eta":170.208,"theta":-133.945,"eta_prime":-173.264,"theta_prime":-128.967,"eta_base":-104.295,"theta_base":-105.531,"v0":10.899,"v1":-30.297,"v2":37.646,"v3":-32.484,"v4":13.563,"amplitude":37.679,"phase_angle":2.397,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.903,"filter_rmsd":0.038,"frame":{"rmsd":0.008,"origin":[75.303,34.591,1.604],"x_axis":[-0.695,0.580,-0.424],"y_axis":[-0.688,-0.366,0.626],"z_axis":[0.208,0.728,0.654],"quaternion":[0.385,-0.066,0.411,0.824]}},{"index":39,"index_chain":39,"chain_name":"A","nt_resnum":39,"nt_name":"PSU","nt_code":"P","is_modified":true,"nt_id":"|1|A|PSU|39||||","linked_nts":["|1|A|A|38||||","|1|A|5MC|40||||"],"nt_type":"RNA","dbn":".","summary":"modified,anti,~C3'-endo,BI,non-canonical,non-pair-contact,helix,hairpin-loop","alpha":-47.734,"beta":160.379,"gamma":53.321,"delta":79.261,"epsilon":-140.089,"zeta":-68.553,"epsilon_zeta":-71.535,"bb_type":"BI","chi":-165.591,"glyco_bond":"anti","C5prime_xyz":[-1.532,8.695,0.915],"P_xyz":[1.080,9.022,0.955],"form":"A","ssZp":4.548,"Dp":4.677,"splay_angle":26.683,"splay_distance":4.177,"splay_ratio":0.232,"eta":174.028,"theta":-132.589,"eta_prime":-168.630,"theta_prime":-131.228,"eta_base":-127.507,"theta_base":-89.595,"v0":2.071,"v1":-25.621,"v2":38.527,"v3":-38.418,"v4":22.804,"amplitude":40.037,"phase_angle":15.790,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.680,"filter_rmsd":0.103,"frame":{"rmsd":0.004,"origin":[76.004,38.175,2.066],"x_axis":[-0.957,0.286,-0.045],"y_axis":[-0.206,-0.562,0.801],"z_axis":[0.204,0.776,0.597],"quaternion":[0.139,0.045,0.447,0.883]}},{"index":40,"index_chain":40,"chain_name":"A","nt_resnum":40,"nt_name":"5MC","nt_code":"c","is_modified":true,"nt_id":"|1|A|5MC|40||||","linked_nts":["|1|A|PSU|39||||","|1|A|U|41||||"],"nt_type":"RNA","dbn":")","summary":"modified,anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem-end,coaxial-stack,hairpin-loop","alpha":-67.366,"beta":172.001,"gamma":56.197,"delta":83.207,"epsilon":-154.223,"zeta":-74.895,"epsilon_zeta":-79.327,"bb_type":"BI","chi":-162.555,"glyco_bond":"anti","C5prime_xyz":[-1.270,8.756,0.681],"P_xyz":[1.360,9.068,0.731],"form":"A","ssZp":4.524,"Dp":4.604,"splay_angle":27.709,"splay_distance":4.355,"splay_ratio":0.241,"eta":163.144,"theta":-148.513,"eta_prime":-177.589,"theta_prime":-149.329,"eta_base":-115.930,"theta_base":-131.744,"v0":0.832,"v1":-22.538,"v2":34.628,"v3":-34.976,"v4":21.523,"amplitude":36.262,"phase_angle":17.268,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.942,"filter_rmsd":0.062,"frame":{"rmsd":0.005,"origin":[74.017,41.469,3.695],"x_axis":[-0.816,-0.365,0.449],"y_axis":[0.579,-0.507,0.639],"z_axis":[-0.006,0.780,0.625],"quaternion":[-0.275,0.129,0.413,0.858]}},{"index":41,"index_chain":41,"chain_name":"A","nt_resnum":41,"nt_name":"U","nt_code":"U","nt_id":"|1|A|U|41||||","linked_nts":["|1|A|5MC|40||||","|1|A|G|42||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-68.226,"beta":-179.367,"gamma":52.444,"delta":78.871,"epsilon":-137.302,"zeta":-84.708,"epsilon_zeta":-52.593,"bb_type":"BI","chi":-169.033,"glyco_bond":"anti","C5prime_xyz":[-1.330,8.637,0.934],"P_xyz":[1.190,9.092,1.445],"form":"A","ssZp":4.536,"Dp":4.752,"splay_angle":24.137,"splay_distance":3.871,"splay_ratio":0.215,"eta":169.432,"theta":-148.779,"eta_prime":177.218,"theta_prime":-143.954,"eta_base":-152.888,"theta_base":-120.497,"v0":3.787,"v1":-27.678,"v2":39.899,"v3":-38.647,"v4":21.995,"amplitude":41.010,"phase_angle":13.366,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.945,"filter_rmsd":0.100,"frame":{"rmsd":0.013,"origin":[72.759,45.349,5.220],"x_axis":[-0.436,-0.737,0.516],"y_axis":[0.898,-0.318,0.305],"z_axis":[-0.061,0.597,0.800],"quaternion":[0.511,-0.142,-0.282,-0.799]}},{"index":42,"index_chain":42,"chain_name":"A","nt_resnum":42,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|42||||","linked_nts":["|1|A|U|41||||","|1|A|G|43||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-47.869,"beta":158.673,"gamma":55.597,"delta":79.758,"epsilon":-160.327,"zeta":-70.305,"epsilon_zeta":-90.022,"bb_type":"BI","chi":-169.008,"glyco_bond":"anti","C5prime_xyz":[-1.791,8.768,0.932],"P_xyz":[0.739,9.374,1.067],"form":"A","ssZp":4.432,"Dp":4.513,"splay_angle":23.538,"splay_distance":3.690,"splay_ratio":0.207,"eta":171.151,"theta":-150.372,"eta_prime":-171.549,"theta_prime":-151.643,"eta_base":-133.928,"theta_base":-124.482,"v0":-1.698,"v1":-22.430,"v2":36.774,"v3":-38.634,"v4":25.420,"amplitude":39.376,"phase_angle":20.946,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.630,"filter_rmsd":0.010,"frame":{"rmsd":0.010,"origin":[70.441,47.125,7.760],"x_axis":[0.044,-0.846,0.532],"y_axis":[0.995,0.085,0.052],"z_axis":[-0.090,0.527,0.845],"quaternion":[0.703,-0.169,-0.221,-0.655]}},{"index":43,"index_chain":43,"chain_name":"A","nt_resnum":43,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|43||||","linked_nts":["|1|A|G|42||||","|1|A|A|44||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem-end,coaxial-stack,junction-loop","alpha":-67.015,"beta":-178.303,"gamma":55.596,"delta":81.592,"epsilon":-154.873,"zeta":-76.392,"epsilon_zeta":-78.480,"bb_type":"BI","chi":-160.250,"glyco_bond":"anti","C5prime_xyz":[-1.340,8.721,0.387],"P_xyz":[1.232,9.115,0.767],"form":"A","ssZp":4.237,"Dp":4.613,"splay_angle":20.949,"splay_distance":3.274,"splay_ratio":0.182,"eta":174.201,"theta":-151.569,"eta_prime":-174.430,"theta_prime":-150.049,"eta_base":-133.984,"theta_base":-124.543,"v0":4.278,"v1":-27.607,"v2":39.116,"v3":-37.605,"v4":21.129,"amplitude":40.077,"phase_angle":12.572,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.882,"filter_rmsd":0.025,"frame":{"rmsd":0.025,"origin":[68.557,48.142,10.766],"x_axis":[0.603,-0.627,0.494],"y_axis":[0.785,0.576,-0.227],"z_axis":[-0.142,0.524,0.840],"quaternion":[0.869,-0.216,-0.183,-0.406]}},{"index":44,"index_chain":44,"chain_name":"A","nt_resnum":44,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|44||||","linked_nts":["|1|A|G|43||||","|1|A|G|45||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C3'-endo,BI,non-canonical,non-pair-contact,helix,junction-loop","alpha":-59.692,"beta":162.125,"gamma":60.042,"delta":85.307,"epsilon":-142.834,"zeta":-57.171,"epsilon_zeta":-85.663,"bb_type":"BI","chi":-159.428,"glyco_bond":"anti","C5prime_xyz":[-1.372,8.724,0.330],"P_xyz":[1.255,8.982,0.062],"form":".","ssZp":4.250,"Dp":4.610,"splay_angle":31.072,"splay_distance":4.898,"splay_ratio":0.268,"eta":173.248,"theta":-120.418,"eta_prime":-171.754,"theta_prime":-119.959,"eta_base":-133.258,"theta_base":-72.583,"v0":0.987,"v1":-22.980,"v2":35.244,"v3":-35.369,"v4":21.629,"amplitude":36.842,"phase_angle":16.936,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.837,"filter_rmsd":0.040,"frame":{"rmsd":0.015,"origin":[67.518,48.887,13.780],"x_axis":[0.894,-0.208,0.397],"y_axis":[0.357,0.866,-0.350],"z_axis":[-0.271,0.454,0.849],"quaternion":[0.950,-0.212,-0.176,-0.149]}},{"index":45,"index_chain":45,"chain_name":"A","nt_resnum":45,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|45||||","linked_nts":["|1|A|A|44||||","|1|A|7MG|46||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C3'-endo,BI,non-canonical,non-pair-contact,multiplet,junction-loop","alpha":-71.930,"beta":-176.932,"gamma":50.985,"delta":87.553,"epsilon":-135.100,"zeta":-78.652,"epsilon_zeta":-56.448,"bb_type":"BI","chi":-149.296,"glyco_bond":"anti","C5prime_xyz":[-1.248,8.761,0.003],"P_xyz":[1.346,9.093,0.197],"form":".","ssZp":4.008,"Dp":4.584,"splay_angle":40.268,"splay_distance":6.583,"splay_ratio":0.344,"eta":168.619,"theta":-141.634,"eta_prime":-168.279,"theta_prime":-128.432,"eta_base":-103.395,"theta_base":-133.424,"v0":2.094,"v1":-24.263,"v2":35.662,"v3":-35.375,"v4":21.204,"amplitude":36.989,"phase_angle":15.395,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.749,"filter_rmsd":0.026,"frame":{"rmsd":0.026,"origin":[70.584,50.527,17.230],"x_axis":[0.819,0.499,-0.284],"y_axis":[-0.574,0.728,-0.374],"z_axis":[0.020,0.469,0.883],"quaternion":[0.926,-0.228,0.082,0.290]}},{"index":46,"index_chain":46,"chain_name":"A","nt_resnum":46,"nt_name":"7MG","nt_code":"g","is_modified":true,"nt_id":"|1|A|7MG|46||||","linked_nts":["|1|A|G|45||||","|1|A|U|47||||"],"nt_type":"RNA","dbn":".","summary":"modified,anti,~C2'-endo,non-canonical,non-pair-contact,multiplet,junction-loop,splayed-apart","alpha":-56.771,"beta":-146.515,"gamma":48.404,"delta":141.599,"epsilon":-102.653,"zeta":-137.859,"epsilon_zeta":35.206,"bb_type":"--","chi":-65.787,"glyco_bond":"anti","C5prime_xyz":[-3.483,6.742,-3.105],"P_xyz":[-1.709,8.437,-4.091],"form":".","ssZp":0.206,"Dp":0.955,"splay_angle":139.043,"splay_distance":18.975,"splay_ratio":0.937,"eta":-143.213,"theta":-107.311,"eta_prime":-133.588,"theta_prime":-149.564,"eta_base":-148.186,"theta_base":-162.672,"v0":-27.436,"v1":38.649,"v2":-34.720,"v3":19.737,"v4":4.703,"amplitude":38.479,"phase_angle":154.464,"puckering":"C2'-endo","sugar_class":"~C2'-endo","bin":"32p","cluster":"1[","suiteness":0.849,"filter_rmsd":0.022,"frame":{"rmsd":0.022,"origin":[70.937,53.191,23.239],"x_axis":[0.796,0.412,-0.444],"y_axis":[-0.553,0.792,-0.258],"z_axis":[0.245,0.451,0.858],"quaternion":[0.928,-0.191,0.185,0.260]}},{"index":47,"index_chain":47,"chain_name":"A","nt_resnum":47,"nt_name":"U","nt_code":"U","nt_id":"|1|A|U|47||||","linked_nts":["|1|A|7MG|46||||","|1|A|C|48||||"],"nt_type":"RNA","dbn":".","summary":"turn,anti,~C2'-endo,non-stack,non-pair-contact,junction-loop,splayed-apart","alpha":62.398,"beta":-164.007,"gamma":44.365,"delta":146.142,"epsilon":-93.662,"zeta":-78.042,"epsilon_zeta":-15.620,"bb_type":"--","chi":-111.994,"glyco_bond":"anti","C5prime_xyz":[-2.181,8.385,-1.552],"P_xyz":[-0.282,9.859,-0.555],"form":".","ssZp":0.260,"Dp":0.393,"splay_angle":157.370,"splay_distance":19.661,"splay_ratio":0.981,"eta":-31.504,"theta":-56.754,"eta_prime":4.796,"theta_prime":-90.978,"eta_base":24.926,"theta_base":-110.734,"v0":-20.928,"v1":34.819,"v2":-35.124,"v3":24.328,"v4":-2.235,"amplitude":36.382,"phase_angle":164.891,"puckering":"C2'-endo","sugar_class":"~C2'-endo","bin":"22p","cluster":"4p","suiteness":0.589,"filter_rmsd":0.101,"frame":{"rmsd":0.007,"origin":[55.697,61.831,30.527],"x_axis":[-0.818,-0.305,-0.488],"y_axis":[0.575,-0.474,-0.667],"z_axis":[-0.028,-0.826,0.564],"quaternion":[-0.260,-0.152,-0.442,0.845]}},{"index":48,"index_chain":48,"chain_name":"A","nt_resnum":48,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|48||||","linked_nts":["|1|A|U|47||||","|1|A|5MC|49||||"],"nt_type":"RNA","dbn":".","summary":"turn,anti,~C2'-endo,non-canonical,non-pair-contact,helix,junction-loop,cap-acceptor,phosphate,splayed-apart","alpha":-73.483,"beta":-174.257,"gamma":161.496,"delta":145.555,"epsilon":-143.540,"zeta":75.586,"epsilon_zeta":140.874,"bb_type":"--","chi":-140.133,"glyco_bond":"anti","C5prime_xyz":[-2.003,8.811,0.014],"P_xyz":[0.065,9.951,-1.049],"form":".","ssZp":1.918,"Dp":1.804,"splay_angle":147.538,"splay_distance":17.533,"splay_ratio":0.960,"eta":-82.547,"theta":53.860,"eta_prime":-29.337,"theta_prime":17.544,"eta_base":1.519,"theta_base":-107.575,"v0":-25.577,"v1":38.354,"v2":-35.634,"v3":22.088,"v4":2.058,"amplitude":38.383,"phase_angle":158.184,"puckering":"C2'-endo","sugar_class":"~C2'-endo","bin":"22t","cluster":"2u","suiteness":0.283,"filter_rmsd":0.064,"frame":{"rmsd":0.015,"origin":[74.079,55.026,29.001],"x_axis":[0.442,0.792,-0.421],"y_axis":[-0.868,0.497,0.024],"z_axis":[0.228,0.355,0.907],"quaternion":[0.843,-0.098,0.193,0.492]}},{"index":49,"index_chain":49,"chain_name":"A","nt_resnum":49,"nt_name":"5MC","nt_code":"c","is_modified":true,"nt_id":"|1|A|5MC|49||||","linked_nts":["|1|A|C|48||||","|1|A|U|50||||"],"nt_type":"RNA","dbn":"(","summary":"modified,anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem-end,coaxial-stack,junction-loop,phosphate,splayed-apart","alpha":50.694,"beta":168.495,"gamma":42.172,"delta":84.343,"epsilon":-145.028,"zeta":-82.064,"epsilon_zeta":-62.964,"bb_type":"BI","chi":-173.643,"glyco_bond":"anti","C5prime_xyz":[-1.203,8.467,1.415],"P_xyz":[1.382,8.340,2.039],"form":"A","ssZp":4.767,"Dp":4.753,"splay_angle":25.828,"splay_distance":4.038,"splay_ratio":0.227,"eta":-56.750,"theta":-145.323,"eta_prime":-36.556,"theta_prime":-142.807,"eta_base":103.218,"theta_base":-130.193,"v0":5.773,"v1":-28.126,"v2":38.726,"v3":-36.021,"v4":19.054,"amplitude":39.332,"phase_angle":10.075,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"23p","cluster":"6d","suiteness":0.520,"filter_rmsd":0.060,"frame":{"rmsd":0.020,"origin":[61.018,56.066,40.652],"x_axis":[0.859,-0.287,0.424],"y_axis":[0.313,-0.362,-0.878],"z_axis":[0.405,0.887,-0.221],"quaternion":[0.565,-0.781,-0.008,-0.265]}},{"index":50,"index_chain":50,"chain_name":"A","nt_resnum":50,"nt_name":"U","nt_code":"U","nt_id":"|1|A|U|50||||","linked_nts":["|1|A|5MC|49||||","|1|A|G|51||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack,phosphate","alpha":-51.651,"beta":177.223,"gamma":42.076,"delta":80.392,"epsilon":-150.600,"zeta":-67.789,"epsilon_zeta":-82.811,"bb_type":"BI","chi":-165.258,"glyco_bond":"anti","C5prime_xyz":[-1.405,8.646,0.598],"P_xyz":[1.090,9.107,1.275],"form":"A","ssZp":4.383,"Dp":4.754,"splay_angle":23.154,"splay_distance":3.680,"splay_ratio":0.203,"eta":174.833,"theta":-146.608,"eta_prime":-176.927,"theta_prime":-142.778,"eta_base":-153.552,"theta_base":-113.825,"v0":9.378,"v1":-32.211,"v2":41.025,"v3":-36.420,"v4":17.596,"amplitude":41.223,"phase_angle":5.621,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.656,"filter_rmsd":0.102,"frame":{"rmsd":0.024,"origin":[61.571,59.864,41.907],"x_axis":[0.833,-0.552,0.021],"y_axis":[-0.083,-0.162,-0.983],"z_axis":[0.547,0.818,-0.181],"quaternion":[0.610,-0.738,0.215,-0.192]}},{"index":51,"index_chain":51,"chain_name":"A","nt_resnum":51,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|51||||","linked_nts":["|1|A|U|50||||","|1|A|U|52||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-63.906,"beta":176.814,"gamma":52.813,"delta":79.429,"epsilon":-150.411,"zeta":-71.324,"epsilon_zeta":-79.087,"bb_type":"BI","chi":-156.606,"glyco_bond":"anti","C5prime_xyz":[-1.394,8.797,0.454],"P_xyz":[1.146,9.250,0.662],"form":"A","ssZp":4.442,"Dp":4.667,"splay_angle":21.280,"splay_distance":3.403,"splay_ratio":0.185,"eta":170.334,"theta":-147.262,"eta_prime":-175.500,"theta_prime":-148.171,"eta_base":-134.168,"theta_base":-122.131,"v0":4.881,"v1":-27.929,"v2":38.912,"v3":-36.848,"v4":20.340,"amplitude":39.710,"phase_angle":11.506,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.981,"filter_rmsd":0.030,"frame":{"rmsd":0.030,"origin":[64.379,62.133,42.618],"x_axis":[0.615,-0.590,-0.522],"y_axis":[-0.501,0.219,-0.837],"z_axis":[0.609,0.777,-0.161],"quaternion":[0.647,-0.624,0.437,-0.035]}},{"index":52,"index_chain":52,"chain_name":"A","nt_resnum":52,"nt_name":"U","nt_code":"U","nt_id":"|1|A|U|52||||","linked_nts":["|1|A|G|51||||","|1|A|G|53||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-64.688,"beta":173.639,"gamma":48.543,"delta":80.289,"epsilon":-156.462,"zeta":-69.422,"epsilon_zeta":-87.040,"bb_type":"BI","chi":-164.047,"glyco_bond":"anti","C5prime_xyz":[-1.364,8.717,0.672],"P_xyz":[1.184,9.224,0.682],"form":"A","ssZp":4.637,"Dp":4.737,"splay_angle":25.470,"splay_distance":4.068,"splay_ratio":0.227,"eta":160.329,"theta":-145.819,"eta_prime":173.859,"theta_prime":-144.342,"eta_base":-141.763,"theta_base":-119.602,"v0":3.151,"v1":-28.489,"v2":41.429,"v3":-40.140,"v4":23.606,"amplitude":42.723,"phase_angle":14.133,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.945,"filter_rmsd":0.099,"frame":{"rmsd":0.020,"origin":[67.350,63.793,42.597],"x_axis":[0.225,-0.453,-0.863],"y_axis":[-0.692,0.549,-0.469],"z_axis":[0.687,0.702,-0.190],"quaternion":[0.629,-0.465,0.615,0.095]}},{"index":53,"index_chain":53,"chain_name":"A","nt_resnum":53,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|53||||","linked_nts":["|1|A|U|52||||","|1|A|5MU|54||||"],"nt_type":"RNA","dbn":"(","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem-end,coaxial-stack,hairpin-loop,kissing-loop","alpha":-56.867,"beta":171.464,"gamma":56.154,"delta":83.914,"epsilon":-159.389,"zeta":-64.873,"epsilon_zeta":-94.515,"bb_type":"BI","chi":-169.237,"glyco_bond":"anti","C5prime_xyz":[-1.659,8.727,1.039],"P_xyz":[0.909,9.332,1.236],"form":"A","ssZp":4.591,"Dp":4.567,"splay_angle":24.528,"splay_distance":3.917,"splay_ratio":0.218,"eta":174.937,"theta":-141.474,"eta_prime":-167.248,"theta_prime":-142.370,"eta_base":-124.719,"theta_base":-111.591,"v0":-0.970,"v1":-23.122,"v2":37.032,"v3":-38.311,"v4":24.921,"amplitude":39.364,"phase_angle":19.821,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.896,"filter_rmsd":0.027,"frame":{"rmsd":0.027,"origin":[71.191,64.299,41.355],"x_axis":[-0.208,-0.141,-0.968],"y_axis":[-0.691,0.722,0.043],"z_axis":[0.693,0.677,-0.248],"quaternion":[0.563,-0.282,0.738,0.244]}},{"index":54,"index_chain":54,"chain_name":"A","nt_resnum":54,"nt_name":"5MU","nt_code":"t","is_modified":true,"nt_id":"|1|A|5MU|54||||","linked_nts":["|1|A|G|53||||","|1|A|PSU|55||||"],"nt_type":"RNA","dbn":".","summary":"modified,anti,~C3'-endo,BI,non-canonical,non-pair-contact,helix,hairpin-loop,kissing-loop","alpha":-79.665,"beta":-172.773,"gamma":57.672,"delta":77.647,"epsilon":-128.577,"zeta":-70.746,"epsilon_zeta":-57.831,"bb_type":"BI","chi":-161.486,"glyco_bond":"anti","C5prime_xyz":[-1.466,8.768,0.640],"P_xyz":[1.083,9.338,0.812],"form":".","ssZp":4.561,"Dp":4.801,"splay_angle":30.726,"splay_distance":4.898,"splay_ratio":0.265,"eta":171.102,"theta":-129.236,"eta_prime":-177.418,"theta_prime":-122.589,"eta_base":-133.299,"theta_base":-76.371,"v0":-1.426,"v1":-22.239,"v2":35.887,"v3":-37.662,"v4":24.764,"amplitude":38.350,"phase_angle":20.645,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.720,"filter_rmsd":0.109,"frame":{"rmsd":0.010,"origin":[74.169,65.147,38.955],"x_axis":[-0.577,0.353,-0.737],"y_axis":[-0.371,0.690,0.621],"z_axis":[0.727,0.632,-0.267],"quaternion":[0.460,-0.006,0.796,0.394]}},{"index":55,"index_chain":55,"chain_name":"A","nt_resnum":55,"nt_name":"PSU","nt_code":"P","is_modified":true,"nt_id":"|1|A|PSU|55||||","linked_nts":["|1|A|5MU|54||||","|1|A|C|56||||"],"nt_type":"RNA","dbn":".","summary":"modified,u-turn,anti,~C3'-endo,BI,non-canonical,non-pair-contact,helix,hairpin-loop,kissing-loop,cap-acceptor","alpha":-49.745,"beta":168.796,"gamma":44.052,"delta":76.601,"epsilon":-140.782,"zeta":-69.884,"epsilon_zeta":-70.898,"bb_type":"BI","chi":-146.980,"glyco_bond":"anti","C5prime_xyz":[-1.547,8.814,-0.015],"P_xyz":[1.037,9.327,-0.263],"form":".","ssZp":4.146,"Dp":4.738,"splay_angle":71.281,"splay_distance":10.663,"splay_ratio":0.583,"eta":165.286,"theta":-115.181,"eta_prime":-173.556,"theta_prime":-155.397,"eta_base":-112.063,"theta_base":145.093,"v0":6.171,"v1":-29.939,"v2":40.886,"v3":-38.275,"v4":20.361,"amplitude":41.536,"phase_angle":10.150,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.586,"filter_rmsd":0.115,"frame":{"rmsd":0.024,"origin":[73.442,68.762,35.732],"x_axis":[-0.776,0.626,0.078],"y_axis":[0.367,0.348,0.863],"z_axis":[0.512,0.698,-0.500],"quaternion":[0.134,0.306,0.810,0.482]}},{"index":56,"index_chain":56,"chain_name":"A","nt_resnum":56,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|56||||","linked_nts":["|1|A|PSU|55||||","|1|A|G|57||||"],"nt_type":"RNA","dbn":"]","summary":"pseudoknotted,turn,u-turn,anti,~C3'-endo,BI,isolated-canonical,non-pair-contact,helix-end,hairpin-loop,kissing-loop","alpha":166.416,"beta":171.805,"gamma":53.305,"delta":83.405,"epsilon":-132.708,"zeta":-70.648,"epsilon_zeta":-62.060,"bb_type":"BI","chi":-161.459,"glyco_bond":"anti","C5prime_xyz":[-1.314,8.713,0.600],"P_xyz":[1.257,8.981,0.850],"form":".","ssZp":4.369,"Dp":4.759,"splay_angle":28.071,"splay_distance":4.520,"splay_ratio":0.243,"eta":31.447,"theta":-126.875,"eta_prime":51.593,"theta_prime":-124.100,"eta_base":25.264,"theta_base":-87.373,"v0":3.842,"v1":-25.288,"v2":35.704,"v3":-34.480,"v4":19.204,"amplitude":36.584,"phase_angle":12.596,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1g","suiteness":0.894,"filter_rmsd":0.066,"frame":{"rmsd":0.014,"origin":[83.983,67.811,34.440],"x_axis":[0.263,-0.484,0.835],"y_axis":[-0.410,0.728,0.550],"z_axis":[-0.874,-0.487,-0.007],"quaternion":[0.704,0.368,-0.607,-0.026]}},{"index":57,"index_chain":57,"chain_name":"A","nt_resnum":57,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|57||||","linked_nts":["|1|A|C|56||||","|1|A|1MA|58||||"],"nt_type":"RNA","dbn":".","summary":"u-turn,anti,~C3'-endo,BI,non-pair-contact,hairpin-loop,kissing-loop,cap-donor,phosphate","alpha":-65.658,"beta":167.070,"gamma":57.463,"delta":81.657,"epsilon":-145.232,"zeta":-67.602,"epsilon_zeta":-77.629,"bb_type":"BI","chi":-159.312,"glyco_bond":"anti","C5prime_xyz":[-1.698,8.806,0.565],"P_xyz":[0.834,9.415,0.566],"form":".","ssZp":4.365,"Dp":4.649,"splay_angle":42.472,"splay_distance":6.625,"splay_ratio":0.362,"eta":164.283,"theta":-142.522,"eta_prime":-174.111,"theta_prime":-131.864,"eta_base":-119.250,"theta_base":-113.836,"v0":4.028,"v1":-26.690,"v2":37.925,"v3":-36.517,"v4":20.629,"amplitude":38.885,"phase_angle":12.758,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.837,"filter_rmsd":0.017,"frame":{"rmsd":0.017,"origin":[81.810,64.723,36.923],"x_axis":[0.153,0.286,0.946],"y_axis":[-0.541,0.826,-0.162],"z_axis":[-0.827,-0.487,0.281],"quaternion":[0.752,0.108,-0.590,0.275]}},{"index":58,"index_chain":58,"chain_name":"A","nt_resnum":58,"nt_name":"1MA","nt_code":"a","is_modified":true,"nt_id":"|1|A|1MA|58||||","linked_nts":["|1|A|G|57||||","|1|A|U|59||||"],"nt_type":"RNA","dbn":".","summary":"modified,u-turn,anti,~C2'-endo,BII,non-canonical,non-pair-contact,helix,hairpin-loop,kissing-loop,phosphate","alpha":-60.812,"beta":-146.102,"gamma":71.756,"delta":156.668,"epsilon":-78.282,"zeta":-169.333,"epsilon_zeta":91.051,"bb_type":"BII","chi":-86.318,"glyco_bond":"anti","C5prime_xyz":[-2.891,7.558,-2.633],"P_xyz":[-0.532,8.747,-2.880],"form":".","ssZp":0.479,"Dp":0.678,"splay_angle":73.917,"splay_distance":11.519,"splay_ratio":0.601,"eta":-131.510,"theta":-108.747,"eta_prime":-105.272,"theta_prime":-171.184,"eta_base":-104.249,"theta_base":159.835,"v0":-24.265,"v1":38.383,"v2":-36.879,"v3":23.918,"v4":0.224,"amplitude":38.991,"phase_angle":161.058,"puckering":"C2'-endo","sugar_class":"~C2'-endo","bin":"32p","cluster":"1[","suiteness":0.332,"filter_rmsd":0.039,"frame":{"rmsd":0.012,"origin":[76.951,61.954,40.475],"x_axis":[-0.114,0.663,0.740],"y_axis":[-0.625,0.531,-0.572],"z_axis":[-0.772,-0.528,0.354],"quaternion":[0.665,-0.017,-0.568,0.484]}},{"index":59,"index_chain":59,"chain_name":"A","nt_resnum":59,"nt_name":"U","nt_code":"U","nt_id":"|1|A|U|59||||","linked_nts":["|1|A|1MA|58||||","|1|A|C|60||||"],"nt_type":"RNA","dbn":".","summary":"turn,anti,~C3'-endo,BI,non-canonical,non-pair-contact,helix-end,hairpin-loop,kissing-loop,cap-donor","alpha":72.618,"beta":-158.840,"gamma":63.678,"delta":84.575,"epsilon":-148.820,"zeta":-53.724,"epsilon_zeta":-95.096,"bb_type":"BI","chi":-165.597,"glyco_bond":"anti","C5prime_xyz":[-1.765,8.723,0.950],"P_xyz":[0.689,9.181,1.820],"form":".","ssZp":4.672,"Dp":4.420,"splay_angle":27.876,"splay_distance":4.456,"splay_ratio":0.241,"eta":1.824,"theta":-119.435,"eta_prime":26.773,"theta_prime":-109.864,"eta_base":49.011,"theta_base":-56.914,"v0":-4.391,"v1":-18.293,"v2":31.764,"v3":-35.724,"v4":25.355,"amplitude":35.270,"phase_angle":25.761,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"23p","cluster":"4d","suiteness":0.411,"filter_rmsd":0.098,"frame":{"rmsd":0.029,"origin":[76.718,53.185,33.009],"x_axis":[0.778,0.389,-0.494],"y_axis":[-0.561,0.784,-0.266],"z_axis":[0.283,0.484,0.828],"quaternion":[0.921,-0.204,0.211,0.258]}},{"index":60,"index_chain":60,"chain_name":"A","nt_resnum":60,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|60||||","linked_nts":["|1|A|U|59||||","|1|A|C|61||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C2'-endo,non-pair-contact,hairpin-loop,kissing-loop,phosphate,splayed-apart","alpha":-72.162,"beta":179.454,"gamma":66.018,"delta":148.304,"epsilon":-97.069,"zeta":-66.356,"epsilon_zeta":-30.714,"bb_type":"--","chi":-117.760,"glyco_bond":"anti","C5prime_xyz":[-2.148,8.506,-1.386],"P_xyz":[0.431,9.220,-1.146],"form":".","ssZp":0.986,"Dp":0.862,"splay_angle":90.645,"splay_distance":13.803,"splay_ratio":0.711,"eta":-171.835,"theta":-40.663,"eta_prime":-130.085,"theta_prime":-68.501,"eta_base":-70.199,"theta_base":-35.796,"v0":-28.760,"v1":40.522,"v2":-36.425,"v3":21.164,"v4":4.697,"amplitude":40.265,"phase_angle":154.774,"puckering":"C2'-endo","sugar_class":"~C2'-endo","bin":"32p","cluster":"1b","suiteness":0.662,"filter_rmsd":0.060,"frame":{"rmsd":0.016,"origin":[79.259,56.843,32.882],"x_axis":[-0.117,0.754,-0.646],"y_axis":[-0.786,0.328,0.524],"z_axis":[0.607,0.569,0.555],"quaternion":[0.664,-0.017,0.472,0.579]}},{"index":61,"index_chain":61,"chain_name":"A","nt_resnum":61,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|61||||","linked_nts":["|1|A|C|60||||","|1|A|A|62||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem-end,coaxial-stack,hairpin-loop,kissing-loop,splayed-apart","alpha":-84.288,"beta":179.827,"gamma":38.237,"delta":82.964,"epsilon":-152.342,"zeta":-74.495,"epsilon_zeta":-77.847,"bb_type":"BI","chi":-166.670,"glyco_bond":"anti","C5prime_xyz":[-1.518,8.733,0.971],"P_xyz":[0.783,9.110,2.172],"form":"A","ssZp":4.450,"Dp":4.518,"splay_angle":25.804,"splay_distance":4.098,"splay_ratio":0.224,"eta":122.358,"theta":-148.348,"eta_prime":168.632,"theta_prime":-144.056,"eta_base":-158.238,"theta_base":-117.429,"v0":2.634,"v1":-25.490,"v2":36.844,"v3":-36.561,"v4":21.493,"amplitude":38.106,"phase_angle":14.786,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"23p","cluster":"2a","suiteness":0.553,"filter_rmsd":0.064,"frame":{"rmsd":0.012,"origin":[71.127,64.441,41.048],"x_axis":[-0.332,-0.246,-0.910],"y_axis":[0.553,-0.833,0.024],"z_axis":[-0.764,-0.495,0.413],"quaternion":[-0.249,-0.521,-0.147,0.803]}},{"index":62,"index_chain":62,"chain_name":"A","nt_resnum":62,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|62||||","linked_nts":["|1|A|C|61||||","|1|A|C|63||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-60.070,"beta":179.638,"gamma":46.853,"delta":80.531,"epsilon":-145.618,"zeta":-74.140,"epsilon_zeta":-71.478,"bb_type":"BI","chi":-158.653,"glyco_bond":"anti","C5prime_xyz":[-1.247,8.759,0.370],"P_xyz":[1.312,9.138,1.050],"form":"A","ssZp":4.177,"Dp":4.664,"splay_angle":19.228,"splay_distance":3.094,"splay_ratio":0.168,"eta":173.000,"theta":-146.629,"eta_prime":-176.940,"theta_prime":-144.857,"eta_base":-142.007,"theta_base":-119.567,"v0":5.909,"v1":-27.755,"v2":38.126,"v3":-35.411,"v4":18.786,"amplitude":38.705,"phase_angle":9.926,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.895,"filter_rmsd":0.043,"frame":{"rmsd":0.016,"origin":[67.312,63.683,42.338],"x_axis":[0.120,-0.600,-0.791],"y_axis":[0.666,-0.543,0.512],"z_axis":[-0.737,-0.588,0.334],"quaternion":[-0.477,-0.576,-0.028,0.663]}},{"index":63,"index_chain":63,"chain_name":"A","nt_resnum":63,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|63||||","linked_nts":["|1|A|A|62||||","|1|A|A|64||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-62.017,"beta":167.262,"gamma":50.948,"delta":80.715,"epsilon":-152.333,"zeta":-70.724,"epsilon_zeta":-81.609,"bb_type":"BI","chi":-152.593,"glyco_bond":"anti","C5prime_xyz":[-1.332,8.819,0.168],"P_xyz":[1.230,9.274,-0.045],"form":"A","ssZp":4.316,"Dp":4.624,"splay_angle":23.621,"splay_distance":3.781,"splay_ratio":0.205,"eta":164.452,"theta":-148.346,"eta_prime":177.872,"theta_prime":-149.605,"eta_base":-143.896,"theta_base":-128.618,"v0":5.394,"v1":-27.308,"v2":37.482,"v3":-35.476,"v4":19.054,"amplitude":38.147,"phase_angle":10.715,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.964,"filter_rmsd":0.067,"frame":{"rmsd":0.016,"origin":[64.564,62.262,42.356],"x_axis":[0.464,-0.765,-0.446],"y_axis":[0.403,-0.266,0.875],"z_axis":[-0.788,-0.587,0.185],"quaternion":[0.588,0.622,-0.145,-0.497]}},{"index":64,"index_chain":64,"chain_name":"A","nt_resnum":64,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|64||||","linked_nts":["|1|A|C|63||||","|1|A|G|65||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-66.852,"beta":179.977,"gamma":44.052,"delta":75.809,"epsilon":-147.481,"zeta":-76.520,"epsilon_zeta":-70.961,"bb_type":"BI","chi":-161.798,"glyco_bond":"anti","C5prime_xyz":[-1.300,8.674,0.598],"P_xyz":[1.246,9.217,0.704],"form":"A","ssZp":4.682,"Dp":4.859,"splay_angle":25.637,"splay_distance":4.000,"splay_ratio":0.226,"eta":158.418,"theta":-150.953,"eta_prime":168.537,"theta_prime":-148.167,"eta_base":-154.827,"theta_base":-122.839,"v0":4.126,"v1":-28.553,"v2":40.180,"v3":-38.759,"v4":22.182,"amplitude":41.216,"phase_angle":12.873,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.791,"filter_rmsd":0.040,"frame":{"rmsd":0.014,"origin":[61.724,59.846,41.727],"x_axis":[0.766,-0.643,-0.003],"y_axis":[0.097,0.112,0.989],"z_axis":[-0.635,-0.758,0.148],"quaternion":[0.712,0.614,-0.222,-0.260]}},{"index":65,"index_chain":65,"chain_name":"A","nt_resnum":65,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|65||||","linked_nts":["|1|A|A|64||||","|1|A|A|66||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem-end,coaxial-stack,junction-loop","alpha":-43.958,"beta":164.226,"gamma":49.876,"delta":79.755,"epsilon":-152.032,"zeta":-73.335,"epsilon_zeta":-78.697,"bb_type":"BI","chi":-172.777,"glyco_bond":"anti","C5prime_xyz":[-1.409,8.588,1.280],"P_xyz":[1.127,9.087,1.244],"form":"A","ssZp":4.922,"Dp":4.757,"splay_angle":25.205,"splay_distance":3.986,"splay_ratio":0.226,"eta":173.618,"theta":-147.330,"eta_prime":-171.984,"theta_prime":-145.410,"eta_base":-130.461,"theta_base":-121.225,"v0":1.522,"v1":-26.597,"v2":39.466,"v3":-39.935,"v4":24.267,"amplitude":41.170,"phase_angle":16.545,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.586,"filter_rmsd":0.017,"frame":{"rmsd":0.017,"origin":[60.770,56.143,40.554],"x_axis":[0.751,-0.457,0.476],"y_axis":[-0.311,0.391,0.866],"z_axis":[-0.582,-0.799,0.152],"quaternion":[0.757,0.550,-0.349,-0.048]}},{"index":66,"index_chain":66,"chain_name":"A","nt_resnum":66,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|66||||","linked_nts":["|1|A|G|65||||","|1|A|A|67||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem-end,coaxial-stack,junction-loop","alpha":-57.891,"beta":178.545,"gamma":52.046,"delta":81.724,"epsilon":-150.972,"zeta":-73.549,"epsilon_zeta":-77.423,"bb_type":"BI","chi":-164.910,"glyco_bond":"anti","C5prime_xyz":[-1.399,8.771,0.783],"P_xyz":[1.124,9.197,1.256],"form":"A","ssZp":4.556,"Dp":4.602,"splay_angle":22.725,"splay_distance":3.605,"splay_ratio":0.198,"eta":177.584,"theta":-145.446,"eta_prime":-170.077,"theta_prime":-142.714,"eta_base":-133.532,"theta_base":-111.939,"v0":-2.886,"v1":-21.641,"v2":36.462,"v3":-38.777,"v4":26.486,"amplitude":39.470,"phase_angle":22.511,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.940,"filter_rmsd":0.046,"frame":{"rmsd":0.016,"origin":[60.749,52.207,39.924],"x_axis":[0.503,-0.070,0.862],"y_axis":[-0.722,0.514,0.463],"z_axis":[-0.475,-0.855,0.208],"quaternion":[0.746,0.442,-0.448,0.219]}},{"index":67,"index_chain":67,"chain_name":"A","nt_resnum":67,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|67||||","linked_nts":["|1|A|A|66||||","|1|A|U|68||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-61.953,"beta":164.096,"gamma":54.240,"delta":83.200,"epsilon":-152.186,"zeta":-78.339,"epsilon_zeta":-73.847,"bb_type":"BI","chi":-162.828,"glyco_bond":"anti","C5prime_xyz":[-1.713,8.684,0.878],"P_xyz":[0.851,9.201,0.747],"form":"A","ssZp":4.706,"Dp":4.672,"splay_angle":23.303,"splay_distance":3.666,"splay_ratio":0.204,"eta":165.633,"theta":-149.301,"eta_prime":-176.941,"theta_prime":-149.824,"eta_base":-129.834,"theta_base":-126.703,"v0":2.445,"v1":-24.868,"v2":36.522,"v3":-36.077,"v4":21.408,"amplitude":37.815,"phase_angle":15.026,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.941,"filter_rmsd":0.044,"frame":{"rmsd":0.020,"origin":[60.578,48.823,41.154],"x_axis":[0.034,0.206,0.978],"y_axis":[-0.907,0.418,-0.056],"z_axis":[-0.420,-0.885,0.201],"quaternion":[0.643,0.322,-0.544,0.433]}},{"index":68,"index_chain":68,"chain_name":"A","nt_resnum":68,"nt_name":"U","nt_code":"U","nt_id":"|1|A|U|68||||","linked_nts":["|1|A|A|67||||","|1|A|U|69||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-59.846,"beta":175.336,"gamma":47.283,"delta":82.185,"epsilon":-152.942,"zeta":-65.390,"epsilon_zeta":-87.551,"bb_type":"BI","chi":-160.127,"glyco_bond":"anti","C5prime_xyz":[-1.487,8.676,0.461],"P_xyz":[1.052,9.148,0.859],"form":"A","ssZp":4.295,"Dp":4.597,"splay_angle":24.347,"splay_distance":3.820,"splay_ratio":0.213,"eta":168.864,"theta":-138.158,"eta_prime":179.443,"theta_prime":-136.061,"eta_base":-143.226,"theta_base":-96.492,"v0":5.324,"v1":-28.401,"v2":39.529,"v3":-37.525,"v4":20.299,"amplitude":40.297,"phase_angle":11.204,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.891,"filter_rmsd":0.102,"frame":{"rmsd":0.011,"origin":[60.660,45.543,42.790],"x_axis":[-0.378,0.564,0.734],"y_axis":[-0.823,0.159,-0.546],"z_axis":[-0.424,-0.810,0.404],"quaternion":[0.544,0.121,-0.532,0.637]}},{"index":69,"index_chain":69,"chain_name":"A","nt_resnum":69,"nt_name":"U","nt_code":"U","nt_id":"|1|A|U|69||||","linked_nts":["|1|A|U|68||||","|1|A|C|70||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-63.754,"beta":168.082,"gamma":55.094,"delta":79.119,"epsilon":-155.366,"zeta":-85.643,"epsilon_zeta":-69.723,"bb_type":"BI","chi":-161.444,"glyco_bond":"anti","C5prime_xyz":[-1.544,8.697,0.756],"P_xyz":[1.051,9.136,0.822],"form":"A","ssZp":4.546,"Dp":4.606,"splay_angle":19.228,"splay_distance":3.024,"splay_ratio":0.168,"eta":165.628,"theta":-160.539,"eta_prime":-176.046,"theta_prime":-161.217,"eta_base":-118.834,"theta_base":-156.862,"v0":2.879,"v1":-26.296,"v2":38.332,"v3":-37.891,"v4":22.261,"amplitude":39.632,"phase_angle":14.713,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.951,"filter_rmsd":0.101,"frame":{"rmsd":0.015,"origin":[58.965,44.247,45.958],"x_axis":[-0.774,0.619,0.135],"y_axis":[-0.393,-0.302,-0.868],"z_axis":[-0.496,-0.725,0.477],"quaternion":[0.317,-0.113,-0.499,0.799]}},{"index":70,"index_chain":70,"chain_name":"A","nt_resnum":70,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|70||||","linked_nts":["|1|A|U|69||||","|1|A|G|71||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-61.653,"beta":164.642,"gamma":53.122,"delta":78.973,"epsilon":-158.517,"zeta":-64.505,"epsilon_zeta":-94.013,"bb_type":"BI","chi":-151.989,"glyco_bond":"anti","C5prime_xyz":[-1.182,8.847,0.099],"P_xyz":[1.445,9.060,-0.149],"form":"A","ssZp":4.197,"Dp":4.565,"splay_angle":20.959,"splay_distance":3.333,"splay_ratio":0.182,"eta":166.731,"theta":-146.186,"eta_prime":173.583,"theta_prime":-148.965,"eta_base":-171.571,"theta_base":-127.000,"v0":2.404,"v1":-25.909,"v2":38.696,"v3":-37.911,"v4":22.383,"amplitude":40.066,"phase_angle":15.032,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.809,"filter_rmsd":0.061,"frame":{"rmsd":0.018,"origin":[59.183,42.558,48.457],"x_axis":[-0.845,0.480,-0.236],"y_axis":[-0.199,-0.692,-0.694],"z_axis":[-0.497,-0.539,0.680],"quaternion":[0.189,-0.204,-0.344,0.897]}},{"index":71,"index_chain":71,"chain_name":"A","nt_resnum":71,"nt_name":"G","nt_code":"G","nt_id":"|1|A|G|71||||","linked_nts":["|1|A|C|70||||","|1|A|C|72||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,coaxial-stack","alpha":-78.355,"beta":173.623,"gamma":60.313,"delta":80.276,"epsilon":-149.552,"zeta":-68.409,"epsilon_zeta":-81.142,"bb_type":"BI","chi":-162.823,"glyco_bond":"anti","C5prime_xyz":[-1.251,8.687,0.575],"P_xyz":[1.295,9.133,0.362],"form":"A","ssZp":4.503,"Dp":4.711,"splay_angle":22.802,"splay_distance":3.620,"splay_ratio":0.202,"eta":160.982,"theta":-142.978,"eta_prime":173.977,"theta_prime":-142.257,"eta_base":-146.283,"theta_base":-113.405,"v0":3.725,"v1":-27.407,"v2":39.195,"v3":-38.256,"v4":21.753,"amplitude":40.302,"phase_angle":13.463,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.761,"filter_rmsd":0.013,"frame":{"rmsd":0.013,"origin":[57.193,41.889,51.046],"x_axis":[-0.732,0.180,-0.657],"y_axis":[0.165,-0.888,-0.428],"z_axis":[-0.661,-0.422,0.621],"quaternion":[0.004,-0.366,-0.236,0.900]}},{"index":72,"index_chain":72,"chain_name":"A","nt_resnum":72,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|72||||","linked_nts":["|1|A|G|71||||","|1|A|A|73||||"],"nt_type":"RNA","dbn":")","summary":"anti,~C3'-endo,BI,canonical,non-pair-contact,helix-end,stem-end,coaxial-stack","alpha":-73.183,"beta":176.236,"gamma":62.079,"delta":82.989,"epsilon":-152.335,"zeta":-67.878,"epsilon_zeta":-84.457,"bb_type":"BI","chi":-161.614,"glyco_bond":"anti","C5prime_xyz":[-1.370,8.792,0.600],"P_xyz":[1.206,9.251,0.467],"form":"A","ssZp":4.559,"Dp":4.635,"splay_angle":26.144,"splay_distance":4.101,"splay_ratio":0.228,"eta":166.055,"theta":-141.481,"eta_prime":-177.499,"theta_prime":-141.934,"eta_base":-131.463,"theta_base":-110.226,"v0":-0.620,"v1":-21.922,"v2":34.861,"v3":-36.212,"v4":23.144,"amplitude":36.989,"phase_angle":19.529,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.832,"filter_rmsd":0.063,"frame":{"rmsd":0.006,"origin":[53.779,42.132,52.224],"x_axis":[-0.402,-0.311,-0.861],"y_axis":[0.451,-0.886,0.109],"z_axis":[-0.797,-0.345,0.497],"quaternion":[-0.228,-0.497,-0.071,0.834]}},{"index":73,"index_chain":73,"chain_name":"A","nt_resnum":73,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|73||||","linked_nts":["|1|A|C|72||||","|1|A|C|74||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C3'-endo,BI,non-pair-contact,ss-non-loop","alpha":-63.297,"beta":177.662,"gamma":50.401,"delta":81.559,"epsilon":-148.155,"zeta":-66.150,"epsilon_zeta":-82.005,"bb_type":"BI","chi":-167.440,"glyco_bond":"anti","C5prime_xyz":[-1.410,8.633,0.931],"P_xyz":[1.137,9.073,1.341],"form":"A","ssZp":4.649,"Dp":4.715,"splay_angle":26.331,"splay_distance":4.056,"splay_ratio":0.230,"eta":167.607,"theta":-137.844,"eta_prime":-177.211,"theta_prime":-133.252,"eta_base":-127.096,"theta_base":-89.844,"v0":2.423,"v1":-25.440,"v2":37.313,"v3":-36.937,"v4":21.804,"amplitude":38.638,"phase_angle":15.050,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.965,"filter_rmsd":0.040,"frame":{"rmsd":0.010,"origin":[49.794,41.163,52.208],"x_axis":[0.091,-0.727,-0.680],"y_axis":[0.611,-0.499,0.615],"z_axis":[-0.787,-0.472,0.398],"quaternion":[-0.498,-0.546,0.053,0.672]}},{"index":74,"index_chain":74,"chain_name":"A","nt_resnum":74,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|74||||","linked_nts":["|1|A|A|73||||","|1|A|C|75||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C3'-endo,BI,non-pair-contact,ss-non-loop","alpha":-66.885,"beta":-174.928,"gamma":50.690,"delta":85.875,"epsilon":-145.004,"zeta":-58.835,"epsilon_zeta":-86.168,"bb_type":"BI","chi":-153.074,"glyco_bond":"anti","C5prime_xyz":[-1.144,8.750,0.187],"P_xyz":[1.453,8.964,0.557],"form":".","ssZp":4.220,"Dp":4.612,"splay_angle":33.450,"splay_distance":5.284,"splay_ratio":0.288,"eta":171.172,"theta":-122.076,"eta_prime":-172.809,"theta_prime":-116.489,"eta_base":-116.234,"theta_base":-72.123,"v0":4.422,"v1":-25.357,"v2":35.616,"v3":-34.014,"v4":18.629,"amplitude":36.382,"phase_angle":11.782,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.886,"filter_rmsd":0.062,"frame":{"rmsd":0.007,"origin":[47.416,38.008,51.294],"x_axis":[0.628,-0.777,-0.044],"y_axis":[0.225,0.128,0.966],"z_axis":[-0.745,-0.617,0.255],"quaternion":[0.709,0.558,-0.247,-0.353]}},{"index":75,"index_chain":75,"chain_name":"A","nt_resnum":75,"nt_name":"C","nt_code":"C","nt_id":"|1|A|C|75||||","linked_nts":["|1|A|C|74||||","|1|A|A|76||||"],"nt_type":"RNA","dbn":".","summary":"anti,~C3'-endo,BII,non-pair-contact,ss-non-loop,splayed-apart","alpha":-52.334,"beta":175.666,"gamma":42.302,"delta":85.557,"epsilon":-131.936,"zeta":163.904,"epsilon_zeta":64.160,"bb_type":"BII","chi":-151.665,"glyco_bond":"anti","C5prime_xyz":[-1.210,8.752,0.108],"P_xyz":[1.373,9.054,0.618],"form":".","ssZp":3.957,"Dp":4.600,"splay_angle":159.780,"splay_distance":18.659,"splay_ratio":0.984,"eta":174.945,"theta":106.471,"eta_prime":-161.919,"theta_prime":109.795,"eta_base":-102.879,"theta_base":-139.313,"v0":2.278,"v1":-22.498,"v2":33.096,"v3":-32.996,"v4":19.239,"amplitude":34.278,"phase_angle":15.087,"puckering":"C3'-endo","sugar_class":"~C3'-endo","bin":"33p","cluster":"1a","suiteness":0.639,"filter_rmsd":0.061,"frame":{"rmsd":0.007,"origin":[47.851,33.103,53.212],"x_axis":[0.734,-0.132,0.667],"y_axis":[-0.447,0.645,0.620],"z_axis":[-0.512,-0.753,0.414],"quaternion":[0.836,0.411,-0.353,0.094]}},{"index":76,"index_chain":76,"chain_name":"A","nt_resnum":76,"nt_name":"A","nt_code":"A","nt_id":"|1|A|A|76||||","linked_nts":["|1|A|C|75||||",null],"nt_type":"RNA","dbn":".","summary":"anti,~C2'-endo,non-stack,ss-non-loop,splayed-apart","alpha":-70.955,"beta":130.178,"gamma":164.639,"delta":160.907,"epsilon":null,"zeta":null,"epsilon_zeta":null,"bb_type":"--","chi":138.467,"glyco_bond":"anti","C5prime_xyz":[-3.169,6.537,3.099],"P_xyz":[-1.713,7.997,4.788],"form":"-","ssZp":null,"Dp":null,"splay_angle":null,"splay_distance":null,"splay_ratio":null,"eta":null,"theta":null,"eta_prime":null,"theta_prime":null,"eta_base":null,"theta_base":null,"v0":-13.597,"v1":30.501,"v2":-34.756,"v3":27.736,"v4":-9.146,"amplitude":34.835,"phase_angle":176.140,"puckering":"C2'-endo","sugar_class":"~C2'-endo","bin":"32t","cluster":"!!","suiteness":0.000,"filter_rmsd":0.039,"frame":{"rmsd":0.010,"origin":[32.233,35.170,63.210],"x_axis":[-0.285,-0.929,-0.236],"y_axis":[0.443,0.091,-0.892],"z_axis":[0.850,-0.358,0.386],"quaternion":[0.546,-0.244,0.497,-0.629]}}],"num_hbonds":113,"hbonds":[{"index":1,"atom1_serNum":19,"atom2_serNum":1566,"donAcc_type":"standard","distance":2.832,"atom1_id":"|1|A|G|1|O6|||","atom2_id":"|1|A|C|72|N4|||","res_short":"GC","res_long":"|1|A|G|1||||,|1|A|C|72||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":2,"atom1_serNum":20,"atom2_serNum":1564,"donAcc_type":"standard","distance":2.879,"atom1_id":"|1|A|G|1|N1|||","atom2_id":"|1|A|C|72|N3|||","res_short":"GC","res_long":"|1|A|G|1||||,|1|A|C|72||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":3,"atom1_serNum":22,"atom2_serNum":1563,"donAcc_type":"standard","distance":2.838,"atom1_id":"|1|A|G|1|N2|||","atom2_id":"|1|A|C|72|O2|||","res_short":"GC","res_long":"|1|A|G|1||||,|1|A|C|72||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":4,"atom1_serNum":39,"atom2_serNum":1546,"donAcc_type":"standard","distance":3.006,"atom1_id":"|1|A|C|2|O2|||","atom2_id":"|1|A|G|71|N2|||","res_short":"CG","res_long":"|1|A|C|2||||,|1|A|G|71||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":5,"atom1_serNum":40,"atom2_serNum":1544,"donAcc_type":"standard","distance":2.973,"atom1_id":"|1|A|C|2|N3|||","atom2_id":"|1|A|G|71|N1|||","res_short":"CG","res_long":"|1|A|C|2||||,|1|A|G|71||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":6,"atom1_serNum":42,"atom2_serNum":1543,"donAcc_type":"standard","distance":2.860,"atom1_id":"|1|A|C|2|N4|||","atom2_id":"|1|A|G|71|O6|||","res_short":"CG","res_long":"|1|A|C|2||||,|1|A|G|71||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":7,"atom1_serNum":55,"atom2_serNum":74,"donAcc_type":"acceptable","distance":3.106,"atom1_id":"|1|A|G|3|O2'|||","atom2_id":"|1|A|G|4|O4'|||","res_short":"GG","res_long":"|1|A|G|3||||,|1|A|G|4||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":8,"atom1_serNum":62,"atom2_serNum":1523,"donAcc_type":"standard","distance":2.940,"atom1_id":"|1|A|G|3|O6|||","atom2_id":"|1|A|C|70|N4|||","res_short":"GC","res_long":"|1|A|G|3||||,|1|A|C|70||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":9,"atom1_serNum":63,"atom2_serNum":1521,"donAcc_type":"standard","distance":2.873,"atom1_id":"|1|A|G|3|N1|||","atom2_id":"|1|A|C|70|N3|||","res_short":"GC","res_long":"|1|A|G|3||||,|1|A|C|70||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":10,"atom1_serNum":65,"atom2_serNum":1520,"donAcc_type":"standard","distance":2.765,"atom1_id":"|1|A|G|3|N2|||","atom2_id":"|1|A|C|70|O2|||","res_short":"GC","res_long":"|1|A|G|3||||,|1|A|C|70||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":11,"atom1_serNum":85,"atom2_serNum":1501,"donAcc_type":"standard","distance":2.913,"atom1_id":"|1|A|G|4|O6|||","atom2_id":"|1|A|U|69|N3|||","res_short":"GU","res_long":"|1|A|G|4||||,|1|A|U|69||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":12,"atom1_serNum":86,"atom2_serNum":1500,"donAcc_type":"standard","distance":2.820,"atom1_id":"|1|A|G|4|N1|||","atom2_id":"|1|A|U|69|O2|||","res_short":"GU","res_long":"|1|A|G|4||||,|1|A|U|69||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":13,"atom1_serNum":108,"atom2_serNum":1483,"donAcc_type":"standard","distance":3.151,"atom1_id":"|1|A|A|5|N6|||","atom2_id":"|1|A|U|68|O4|||","res_short":"AU","res_long":"|1|A|A|5||||,|1|A|U|68||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":14,"atom1_serNum":109,"atom2_serNum":1481,"donAcc_type":"standard","distance":2.879,"atom1_id":"|1|A|A|5|N1|||","atom2_id":"|1|A|U|68|N3|||","res_short":"AU","res_long":"|1|A|A|5||||,|1|A|U|68||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":15,"atom1_serNum":128,"atom2_serNum":1462,"donAcc_type":"standard","distance":2.781,"atom1_id":"|1|A|U|6|N3|||","atom2_id":"|1|A|A|67|N1|||","res_short":"UA","res_long":"|1|A|U|6||||,|1|A|A|67||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":16,"atom1_serNum":130,"atom2_serNum":1461,"donAcc_type":"standard","distance":3.037,"atom1_id":"|1|A|U|6|O4|||","atom2_id":"|1|A|A|67|N6|||","res_short":"UA","res_long":"|1|A|U|6||||,|1|A|A|67||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":17,"atom1_serNum":143,"atom2_serNum":1063,"donAcc_type":"acceptable","distance":2.677,"atom1_id":"|1|A|U|7|O2'|||","atom2_id":"|1|A|5MC|49|OP2|||","res_short":"Uc","res_long":"|1|A|U|7||||,|1|A|5MC|49||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":18,"atom1_serNum":148,"atom2_serNum":1440,"donAcc_type":"standard","distance":2.733,"atom1_id":"|1|A|U|7|N3|||","atom2_id":"|1|A|A|66|N1|||","res_short":"UA","res_long":"|1|A|U|7||||,|1|A|A|66||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":19,"atom1_serNum":150,"atom2_serNum":1439,"donAcc_type":"standard","distance":2.800,"atom1_id":"|1|A|U|7|O4|||","atom2_id":"|1|A|A|66|N6|||","res_short":"UA","res_long":"|1|A|U|7||||,|1|A|A|66||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":20,"atom1_serNum":163,"atom2_serNum":451,"donAcc_type":"acceptable","distance":2.682,"atom1_id":"|1|A|U|8|O2'|||","atom2_id":"|1|A|A|21|N1|||","res_short":"UA","res_long":"|1|A|U|8||||,|1|A|A|21||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":21,"atom1_serNum":163,"atom2_serNum":1047,"donAcc_type":"acceptable","distance":3.621,"atom1_id":"|1|A|U|8|O2'|||","atom2_id":"|1|A|C|48|O4'|||","res_short":"UC","res_long":"|1|A|U|8||||,|1|A|C|48||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":22,"atom1_serNum":167,"atom2_serNum":296,"donAcc_type":"standard","distance":3.005,"atom1_id":"|1|A|U|8|O2|||","atom2_id":"|1|A|A|14|N6|||","res_short":"UA","res_long":"|1|A|U|8||||,|1|A|A|14||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":23,"atom1_serNum":168,"atom2_serNum":293,"donAcc_type":"standard","distance":2.741,"atom1_id":"|1|A|U|8|N3|||","atom2_id":"|1|A|A|14|N7|||","res_short":"UA","res_long":"|1|A|U|8||||,|1|A|A|14||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":24,"atom1_serNum":175,"atom2_serNum":276,"donAcc_type":"standard","distance":3.006,"atom1_id":"|1|A|A|9|OP2|||","atom2_id":"|1|A|C|13|N4|||","res_short":"AC","res_long":"|1|A|A|9||||,|1|A|C|13||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":25,"atom1_serNum":176,"atom2_serNum":1017,"donAcc_type":"standard","distance":3.340,"atom1_id":"|1|A|A|9|O5'|||","atom2_id":"|1|A|7MG|46|N2|||","res_short":"Ag","res_long":"|1|A|A|9||||,|1|A|7MG|46||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":26,"atom1_serNum":183,"atom2_serNum":236,"donAcc_type":"acceptable","distance":2.900,"atom1_id":"|1|A|A|9|O2'|||","atom2_id":"|1|A|C|11|N4|||","res_short":"AC","res_long":"|1|A|A|9||||,|1|A|C|11||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":27,"atom1_serNum":187,"atom2_serNum":495,"donAcc_type":"standard","distance":2.859,"atom1_id":"|1|A|A|9|N7|||","atom2_id":"|1|A|A|23|N6|||","res_short":"AA","res_long":"|1|A|A|9||||,|1|A|A|23||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":28,"atom1_serNum":190,"atom2_serNum":480,"donAcc_type":"standard","distance":3.115,"atom1_id":"|1|A|A|9|N6|||","atom2_id":"|1|A|A|23|OP2|||","res_short":"AA","res_long":"|1|A|A|9||||,|1|A|A|23||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":29,"atom1_serNum":190,"atom2_serNum":492,"donAcc_type":"standard","distance":2.922,"atom1_id":"|1|A|A|9|N6|||","atom2_id":"|1|A|A|23|N7|||","res_short":"AA","res_long":"|1|A|A|9||||,|1|A|A|23||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":30,"atom1_serNum":212,"atom2_serNum":540,"donAcc_type":"standard","distance":2.839,"atom1_id":"|1|A|2MG|10|O6|||","atom2_id":"|1|A|C|25|N4|||","res_short":"gC","res_long":"|1|A|2MG|10||||,|1|A|C|25||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":31,"atom1_serNum":212,"atom2_serNum":994,"donAcc_type":"standard","distance":3.062,"atom1_id":"|1|A|2MG|10|O6|||","atom2_id":"|1|A|G|45|N2|||","res_short":"gG","res_long":"|1|A|2MG|10||||,|1|A|G|45||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":32,"atom1_serNum":213,"atom2_serNum":538,"donAcc_type":"standard","distance":2.919,"atom1_id":"|1|A|2MG|10|N1|||","atom2_id":"|1|A|C|25|N3|||","res_short":"gC","res_long":"|1|A|2MG|10||||,|1|A|C|25||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":33,"atom1_serNum":215,"atom2_serNum":537,"donAcc_type":"standard","distance":2.925,"atom1_id":"|1|A|2MG|10|N2|||","atom2_id":"|1|A|C|25|O2|||","res_short":"gC","res_long":"|1|A|2MG|10||||,|1|A|C|25||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":34,"atom1_serNum":229,"atom2_serNum":245,"donAcc_type":"acceptable","distance":3.135,"atom1_id":"|1|A|C|11|O2'|||","atom2_id":"|1|A|U|12|O4'|||","res_short":"CU","res_long":"|1|A|C|11||||,|1|A|U|12||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":35,"atom1_serNum":233,"atom2_serNum":520,"donAcc_type":"standard","distance":2.699,"atom1_id":"|1|A|C|11|O2|||","atom2_id":"|1|A|G|24|N2|||","res_short":"CG","res_long":"|1|A|C|11||||,|1|A|G|24||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":36,"atom1_serNum":234,"atom2_serNum":518,"donAcc_type":"standard","distance":2.823,"atom1_id":"|1|A|C|11|N3|||","atom2_id":"|1|A|G|24|N1|||","res_short":"CG","res_long":"|1|A|C|11||||,|1|A|G|24||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":37,"atom1_serNum":236,"atom2_serNum":517,"donAcc_type":"standard","distance":3.004,"atom1_id":"|1|A|C|11|N4|||","atom2_id":"|1|A|G|24|O6|||","res_short":"CG","res_long":"|1|A|C|11||||,|1|A|G|24||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":38,"atom1_serNum":254,"atom2_serNum":496,"donAcc_type":"standard","distance":2.955,"atom1_id":"|1|A|U|12|N3|||","atom2_id":"|1|A|A|23|N1|||","res_short":"UA","res_long":"|1|A|U|12||||,|1|A|A|23||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":39,"atom1_serNum":256,"atom2_serNum":495,"donAcc_type":"standard","distance":2.812,"atom1_id":"|1|A|U|12|O4|||","atom2_id":"|1|A|A|23|N6|||","res_short":"UA","res_long":"|1|A|U|12||||,|1|A|A|23||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":40,"atom1_serNum":269,"atom2_serNum":285,"donAcc_type":"acceptable","distance":3.280,"atom1_id":"|1|A|C|13|O2'|||","atom2_id":"|1|A|A|14|O4'|||","res_short":"CA","res_long":"|1|A|C|13||||,|1|A|A|14||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":41,"atom1_serNum":273,"atom2_serNum":475,"donAcc_type":"standard","distance":2.735,"atom1_id":"|1|A|C|13|O2|||","atom2_id":"|1|A|G|22|N2|||","res_short":"CG","res_long":"|1|A|C|13||||,|1|A|G|22||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":42,"atom1_serNum":274,"atom2_serNum":473,"donAcc_type":"standard","distance":2.901,"atom1_id":"|1|A|C|13|N3|||","atom2_id":"|1|A|G|22|N1|||","res_short":"CG","res_long":"|1|A|C|13||||,|1|A|G|22||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":43,"atom1_serNum":276,"atom2_serNum":472,"donAcc_type":"standard","distance":2.884,"atom1_id":"|1|A|C|13|N4|||","atom2_id":"|1|A|G|22|O6|||","res_short":"CG","res_long":"|1|A|C|13||||,|1|A|G|22||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":44,"atom1_serNum":319,"atom2_serNum":1055,"donAcc_type":"standard","distance":2.783,"atom1_id":"|1|A|G|15|N1|||","atom2_id":"|1|A|C|48|O2|||","res_short":"GC","res_long":"|1|A|G|15||||,|1|A|C|48||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":45,"atom1_serNum":321,"atom2_serNum":1056,"donAcc_type":"standard","distance":2.833,"atom1_id":"|1|A|G|15|N2|||","atom2_id":"|1|A|C|48|N3|||","res_short":"GC","res_long":"|1|A|G|15||||,|1|A|C|48||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":46,"atom1_serNum":335,"atom2_serNum":388,"donAcc_type":"acceptable","distance":3.570,"atom1_id":"|1|A|H2U|16|O2'|||","atom2_id":"|1|A|G|19|OP1|||","res_short":"uG","res_long":"|1|A|H2U|16||||,|1|A|G|19||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":47,"atom1_serNum":335,"atom2_serNum":1292,"donAcc_type":"acceptable","distance":2.894,"atom1_id":"|1|A|H2U|16|O2'|||","atom2_id":"|1|A|U|59|O4|||","res_short":"uU","res_long":"|1|A|H2U|16||||,|1|A|U|59||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":48,"atom1_serNum":338,"atom2_serNum":1290,"donAcc_type":"standard","distance":2.610,"atom1_id":"|1|A|H2U|16|O2|||","atom2_id":"|1|A|U|59|N3|||","res_short":"uU","res_long":"|1|A|H2U|16||||,|1|A|U|59||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":49,"atom1_serNum":339,"atom2_serNum":1289,"donAcc_type":"standard","distance":2.799,"atom1_id":"|1|A|H2U|16|N3|||","atom2_id":"|1|A|U|59|O2|||","res_short":"uU","res_long":"|1|A|H2U|16||||,|1|A|U|59||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":50,"atom1_serNum":355,"atom2_serNum":365,"donAcc_type":"acceptable","distance":2.966,"atom1_id":"|1|A|H2U|17|O2'|||","atom2_id":"|1|A|G|18|OP1|||","res_short":"uG","res_long":"|1|A|H2U|17||||,|1|A|G|18||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":51,"atom1_serNum":374,"atom2_serNum":1247,"donAcc_type":"acceptable","distance":3.044,"atom1_id":"|1|A|G|18|O2'|||","atom2_id":"|1|A|G|57|N1|||","res_short":"GG","res_long":"|1|A|G|18||||,|1|A|G|57||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":52,"atom1_serNum":374,"atom2_serNum":1249,"donAcc_type":"acceptable","distance":2.713,"atom1_id":"|1|A|G|18|O2'|||","atom2_id":"|1|A|G|57|N2|||","res_short":"GG","res_long":"|1|A|G|18||||,|1|A|G|57||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":53,"atom1_serNum":382,"atom2_serNum":1196,"donAcc_type":"standard","distance":2.779,"atom1_id":"|1|A|G|18|N1|||","atom2_id":"|1|A|PSU|55|O4|||","res_short":"GP","res_long":"|1|A|G|18||||,|1|A|PSU|55||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":54,"atom1_serNum":384,"atom2_serNum":1196,"donAcc_type":"standard","distance":2.939,"atom1_id":"|1|A|G|18|N2|||","atom2_id":"|1|A|PSU|55|O4|||","res_short":"GP","res_long":"|1|A|G|18||||,|1|A|PSU|55||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":55,"atom1_serNum":384,"atom2_serNum":1255,"donAcc_type":"standard","distance":3.222,"atom1_id":"|1|A|G|18|N2|||","atom2_id":"|1|A|1MA|58|O5'|||","res_short":"Ga","res_long":"|1|A|G|18||||,|1|A|1MA|58||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":56,"atom1_serNum":384,"atom2_serNum":1258,"donAcc_type":"standard","distance":3.114,"atom1_id":"|1|A|G|18|N2|||","atom2_id":"|1|A|1MA|58|O4'|||","res_short":"Ga","res_long":"|1|A|G|18||||,|1|A|1MA|58||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":57,"atom1_serNum":388,"atom2_serNum":1312,"donAcc_type":"standard","distance":3.272,"atom1_id":"|1|A|G|19|OP1|||","atom2_id":"|1|A|C|60|N4|||","res_short":"GC","res_long":"|1|A|G|19||||,|1|A|C|60||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":58,"atom1_serNum":393,"atom2_serNum":1249,"donAcc_type":"standard","distance":3.171,"atom1_id":"|1|A|G|19|O4'|||","atom2_id":"|1|A|G|57|N2|||","res_short":"GG","res_long":"|1|A|G|19||||,|1|A|G|57||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":59,"atom1_serNum":404,"atom2_serNum":1226,"donAcc_type":"standard","distance":3.030,"atom1_id":"|1|A|G|19|O6|||","atom2_id":"|1|A|C|56|N4|||","res_short":"GC","res_long":"|1|A|G|19||||,|1|A|C|56||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":60,"atom1_serNum":405,"atom2_serNum":1224,"donAcc_type":"standard","distance":2.927,"atom1_id":"|1|A|G|19|N1|||","atom2_id":"|1|A|C|56|N3|||","res_short":"GC","res_long":"|1|A|G|19||||,|1|A|C|56||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":61,"atom1_serNum":407,"atom2_serNum":1223,"donAcc_type":"standard","distance":2.817,"atom1_id":"|1|A|G|19|N2|||","atom2_id":"|1|A|C|56|O2|||","res_short":"GC","res_long":"|1|A|G|19||||,|1|A|C|56||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":62,"atom1_serNum":430,"atom2_serNum":461,"donAcc_type":"standard","distance":3.240,"atom1_id":"|1|A|G|20|N2|||","atom2_id":"|1|A|G|22|O4'|||","res_short":"GG","res_long":"|1|A|G|20||||,|1|A|G|22||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":63,"atom1_serNum":469,"atom2_serNum":1015,"donAcc_type":"standard","distance":2.868,"atom1_id":"|1|A|G|22|N7|||","atom2_id":"|1|A|7MG|46|N1|||","res_short":"Gg","res_long":"|1|A|G|22||||,|1|A|7MG|46||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":64,"atom1_serNum":472,"atom2_serNum":1017,"donAcc_type":"standard","distance":2.994,"atom1_id":"|1|A|G|22|O6|||","atom2_id":"|1|A|7MG|46|N2|||","res_short":"Gg","res_long":"|1|A|G|22||||,|1|A|7MG|46||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":65,"atom1_serNum":560,"atom2_serNum":969,"donAcc_type":"standard","distance":2.844,"atom1_id":"|1|A|M2G|26|O6|||","atom2_id":"|1|A|A|44|N6|||","res_short":"gA","res_long":"|1|A|M2G|26||||,|1|A|A|44||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":66,"atom1_serNum":561,"atom2_serNum":970,"donAcc_type":"standard","distance":2.870,"atom1_id":"|1|A|M2G|26|N1|||","atom2_id":"|1|A|A|44|N1|||","res_short":"gA","res_long":"|1|A|M2G|26||||,|1|A|A|44||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":67,"atom1_serNum":582,"atom2_serNum":949,"donAcc_type":"standard","distance":3.023,"atom1_id":"|1|A|C|27|O2|||","atom2_id":"|1|A|G|43|N2|||","res_short":"CG","res_long":"|1|A|C|27||||,|1|A|G|43||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":68,"atom1_serNum":583,"atom2_serNum":947,"donAcc_type":"standard","distance":2.980,"atom1_id":"|1|A|C|27|N3|||","atom2_id":"|1|A|G|43|N1|||","res_short":"CG","res_long":"|1|A|C|27||||,|1|A|G|43||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":69,"atom1_serNum":585,"atom2_serNum":946,"donAcc_type":"standard","distance":2.923,"atom1_id":"|1|A|C|27|N4|||","atom2_id":"|1|A|G|43|O6|||","res_short":"CG","res_long":"|1|A|C|27||||,|1|A|G|43||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":70,"atom1_serNum":602,"atom2_serNum":926,"donAcc_type":"standard","distance":2.771,"atom1_id":"|1|A|C|28|O2|||","atom2_id":"|1|A|G|42|N2|||","res_short":"CG","res_long":"|1|A|C|28||||,|1|A|G|42||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":71,"atom1_serNum":603,"atom2_serNum":924,"donAcc_type":"standard","distance":2.981,"atom1_id":"|1|A|C|28|N3|||","atom2_id":"|1|A|G|42|N1|||","res_short":"CG","res_long":"|1|A|C|28||||,|1|A|G|42||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":72,"atom1_serNum":605,"atom2_serNum":923,"donAcc_type":"standard","distance":3.151,"atom1_id":"|1|A|C|28|N4|||","atom2_id":"|1|A|G|42|O6|||","res_short":"CG","res_long":"|1|A|C|28||||,|1|A|G|42||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":73,"atom1_serNum":625,"atom2_serNum":903,"donAcc_type":"standard","distance":3.061,"atom1_id":"|1|A|A|29|N6|||","atom2_id":"|1|A|U|41|O4|||","res_short":"AU","res_long":"|1|A|A|29||||,|1|A|U|41||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":74,"atom1_serNum":626,"atom2_serNum":901,"donAcc_type":"standard","distance":2.871,"atom1_id":"|1|A|A|29|N1|||","atom2_id":"|1|A|U|41|N3|||","res_short":"AU","res_long":"|1|A|A|29||||,|1|A|U|41||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":75,"atom1_serNum":647,"atom2_serNum":882,"donAcc_type":"standard","distance":3.356,"atom1_id":"|1|A|G|30|O6|||","atom2_id":"|1|A|5MC|40|N4|||","res_short":"Gc","res_long":"|1|A|G|30||||,|1|A|5MC|40||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":76,"atom1_serNum":648,"atom2_serNum":880,"donAcc_type":"standard","distance":3.050,"atom1_id":"|1|A|G|30|N1|||","atom2_id":"|1|A|5MC|40|N3|||","res_short":"Gc","res_long":"|1|A|G|30||||,|1|A|5MC|40||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":77,"atom1_serNum":650,"atom2_serNum":879,"donAcc_type":"standard","distance":2.691,"atom1_id":"|1|A|G|30|N2|||","atom2_id":"|1|A|5MC|40|O2|||","res_short":"Gc","res_long":"|1|A|G|30||||,|1|A|5MC|40||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":78,"atom1_serNum":671,"atom2_serNum":851,"donAcc_type":"questionable","distance":3.184,"atom1_id":"|1|A|A|31|N1|||","atom2_id":"|1|A|PSU|39|O2|||","res_short":"AP","res_long":"|1|A|A|31||||,|1|A|PSU|39||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":79,"atom1_serNum":681,"atom2_serNum":840,"donAcc_type":"standard","distance":3.012,"atom1_id":"|1|A|OMC|32|O2|||","atom2_id":"|1|A|A|38|N6|||","res_short":"cA","res_long":"|1|A|OMC|32||||,|1|A|A|38||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":80,"atom1_serNum":706,"atom2_serNum":754,"donAcc_type":"acceptable","distance":2.368,"atom1_id":"|1|A|U|33|O2'|||","atom2_id":"|1|A|A|35|N7|||","res_short":"UA","res_long":"|1|A|U|33||||,|1|A|A|35||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":81,"atom1_serNum":706,"atom2_serNum":820,"donAcc_type":"acceptable","distance":3.411,"atom1_id":"|1|A|U|33|O2'|||","atom2_id":"|1|A|YYG|37|O22|||","res_short":"Ug","res_long":"|1|A|U|33||||,|1|A|YYG|37||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":82,"atom1_serNum":711,"atom2_serNum":764,"donAcc_type":"standard","distance":2.799,"atom1_id":"|1|A|U|33|N3|||","atom2_id":"|1|A|A|36|OP2|||","res_short":"UA","res_long":"|1|A|U|33||||,|1|A|A|36||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":83,"atom1_serNum":726,"atom2_serNum":746,"donAcc_type":"acceptable","distance":3.327,"atom1_id":"|1|A|OMG|34|O2'|||","atom2_id":"|1|A|A|35|O4'|||","res_short":"gA","res_long":"|1|A|OMG|34||||,|1|A|A|35||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":84,"atom1_serNum":757,"atom2_serNum":820,"donAcc_type":"standard","distance":3.729,"atom1_id":"|1|A|A|35|N6|||","atom2_id":"|1|A|YYG|37|O22|||","res_short":"Ag","res_long":"|1|A|A|35||||,|1|A|YYG|37||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":85,"atom1_serNum":772,"atom2_serNum":790,"donAcc_type":"acceptable","distance":2.488,"atom1_id":"|1|A|A|36|O2'|||","atom2_id":"|1|A|YYG|37|O4'|||","res_short":"Ag","res_long":"|1|A|A|36||||,|1|A|YYG|37||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":86,"atom1_serNum":779,"atom2_serNum":815,"donAcc_type":"standard","distance":3.246,"atom1_id":"|1|A|A|36|N6|||","atom2_id":"|1|A|YYG|37|O17|||","res_short":"Ag","res_long":"|1|A|A|36||||,|1|A|YYG|37||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":87,"atom1_serNum":779,"atom2_serNum":818,"donAcc_type":"unknown","distance":2.939,"atom1_id":"|1|A|A|36|N6|||","atom2_id":"|1|A|YYG|37|N20|||","res_short":"Ag","res_long":"|1|A|A|36||||,|1|A|YYG|37||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":88,"atom1_serNum":779,"atom2_serNum":820,"donAcc_type":"standard","distance":3.252,"atom1_id":"|1|A|A|36|N6|||","atom2_id":"|1|A|YYG|37|O22|||","res_short":"Ag","res_long":"|1|A|A|36||||,|1|A|YYG|37||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":89,"atom1_serNum":916,"atom2_serNum":935,"donAcc_type":"acceptable","distance":3.225,"atom1_id":"|1|A|G|42|O2'|||","atom2_id":"|1|A|G|43|O4'|||","res_short":"GG","res_long":"|1|A|G|42||||,|1|A|G|43||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":90,"atom1_serNum":1007,"atom2_serNum":1043,"donAcc_type":"acceptable","distance":3.547,"atom1_id":"|1|A|7MG|46|O2'|||","atom2_id":"|1|A|C|48|OP2|||","res_short":"gC","res_long":"|1|A|7MG|46||||,|1|A|C|48||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":91,"atom1_serNum":1031,"atom2_serNum":1083,"donAcc_type":"acceptable","distance":2.706,"atom1_id":"|1|A|U|47|O2'|||","atom2_id":"|1|A|U|50|OP1|||","res_short":"UU","res_long":"|1|A|U|47||||,|1|A|U|50||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":92,"atom1_serNum":1051,"atom2_serNum":1062,"donAcc_type":"acceptable","distance":3.125,"atom1_id":"|1|A|C|48|O2'|||","atom2_id":"|1|A|5MC|49|OP1|||","res_short":"Cc","res_long":"|1|A|C|48||||,|1|A|5MC|49||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":93,"atom1_serNum":1051,"atom2_serNum":1285,"donAcc_type":"acceptable","distance":3.068,"atom1_id":"|1|A|C|48|O2'|||","atom2_id":"|1|A|U|59|O2'|||","res_short":"CU","res_long":"|1|A|C|48||||,|1|A|U|59||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":94,"atom1_serNum":1075,"atom2_serNum":1419,"donAcc_type":"standard","distance":2.916,"atom1_id":"|1|A|5MC|49|O2|||","atom2_id":"|1|A|G|65|N2|||","res_short":"cG","res_long":"|1|A|5MC|49||||,|1|A|G|65||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":95,"atom1_serNum":1076,"atom2_serNum":1417,"donAcc_type":"standard","distance":3.037,"atom1_id":"|1|A|5MC|49|N3|||","atom2_id":"|1|A|G|65|N1|||","res_short":"cG","res_long":"|1|A|5MC|49||||,|1|A|G|65||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":96,"atom1_serNum":1078,"atom2_serNum":1416,"donAcc_type":"standard","distance":3.011,"atom1_id":"|1|A|5MC|49|N4|||","atom2_id":"|1|A|G|65|O6|||","res_short":"cG","res_long":"|1|A|5MC|49||||,|1|A|G|65||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":97,"atom1_serNum":1097,"atom2_serNum":1395,"donAcc_type":"standard","distance":2.789,"atom1_id":"|1|A|U|50|N3|||","atom2_id":"|1|A|A|64|N1|||","res_short":"UA","res_long":"|1|A|U|50||||,|1|A|A|64||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":98,"atom1_serNum":1099,"atom2_serNum":1394,"donAcc_type":"standard","distance":2.814,"atom1_id":"|1|A|U|50|O4|||","atom2_id":"|1|A|A|64|N6|||","res_short":"UA","res_long":"|1|A|U|50||||,|1|A|A|64||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":99,"atom1_serNum":1119,"atom2_serNum":1374,"donAcc_type":"standard","distance":2.889,"atom1_id":"|1|A|G|51|O6|||","atom2_id":"|1|A|C|63|N4|||","res_short":"GC","res_long":"|1|A|G|51||||,|1|A|C|63||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":100,"atom1_serNum":1120,"atom2_serNum":1372,"donAcc_type":"standard","distance":2.795,"atom1_id":"|1|A|G|51|N1|||","atom2_id":"|1|A|C|63|N3|||","res_short":"GC","res_long":"|1|A|G|51||||,|1|A|C|63||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":101,"atom1_serNum":1122,"atom2_serNum":1371,"donAcc_type":"standard","distance":2.743,"atom1_id":"|1|A|G|51|N2|||","atom2_id":"|1|A|C|63|O2|||","res_short":"GC","res_long":"|1|A|G|51||||,|1|A|C|63||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":102,"atom1_serNum":1140,"atom2_serNum":1353,"donAcc_type":"standard","distance":2.816,"atom1_id":"|1|A|U|52|N3|||","atom2_id":"|1|A|A|62|N1|||","res_short":"UA","res_long":"|1|A|U|52||||,|1|A|A|62||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":103,"atom1_serNum":1142,"atom2_serNum":1352,"donAcc_type":"standard","distance":2.963,"atom1_id":"|1|A|U|52|O4|||","atom2_id":"|1|A|A|62|N6|||","res_short":"UA","res_long":"|1|A|U|52||||,|1|A|A|62||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":104,"atom1_serNum":1162,"atom2_serNum":1332,"donAcc_type":"standard","distance":2.947,"atom1_id":"|1|A|G|53|O6|||","atom2_id":"|1|A|C|61|N4|||","res_short":"GC","res_long":"|1|A|G|53||||,|1|A|C|61||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":105,"atom1_serNum":1163,"atom2_serNum":1330,"donAcc_type":"standard","distance":2.872,"atom1_id":"|1|A|G|53|N1|||","atom2_id":"|1|A|C|61|N3|||","res_short":"GC","res_long":"|1|A|G|53||||,|1|A|C|61||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":106,"atom1_serNum":1165,"atom2_serNum":1329,"donAcc_type":"standard","distance":2.796,"atom1_id":"|1|A|G|53|N2|||","atom2_id":"|1|A|C|61|O2|||","res_short":"GC","res_long":"|1|A|G|53||||,|1|A|C|61||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":107,"atom1_serNum":1170,"atom2_serNum":1266,"donAcc_type":"standard","distance":2.917,"atom1_id":"|1|A|5MU|54|N3|||","atom2_id":"|1|A|1MA|58|N7|||","res_short":"ta","res_long":"|1|A|5MU|54||||,|1|A|1MA|58||||","atom_pair":"N:N","residue_pair":"nt:nt"},{"index":108,"atom1_serNum":1175,"atom2_serNum":1269,"donAcc_type":"standard","distance":3.247,"atom1_id":"|1|A|5MU|54|O2|||","atom2_id":"|1|A|1MA|58|N6|||","res_short":"ta","res_long":"|1|A|5MU|54||||,|1|A|1MA|58||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":109,"atom1_serNum":1191,"atom2_serNum":1254,"donAcc_type":"standard","distance":2.766,"atom1_id":"|1|A|PSU|55|N3|||","atom2_id":"|1|A|1MA|58|OP2|||","res_short":"Pa","res_long":"|1|A|PSU|55||||,|1|A|1MA|58||||","atom_pair":"N:O","residue_pair":"nt:nt"},{"index":110,"atom1_serNum":1199,"atom2_serNum":1243,"donAcc_type":"acceptable","distance":2.717,"atom1_id":"|1|A|PSU|55|O2'|||","atom2_id":"|1|A|G|57|N7|||","res_short":"PG","res_long":"|1|A|PSU|55||||,|1|A|G|57||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":111,"atom1_serNum":1262,"atom2_serNum":1297,"donAcc_type":"acceptable","distance":2.418,"atom1_id":"|1|A|1MA|58|O2'|||","atom2_id":"|1|A|C|60|OP2|||","res_short":"aC","res_long":"|1|A|1MA|58||||,|1|A|C|60||||","atom_pair":"O:O","residue_pair":"nt:nt"},{"index":112,"atom1_serNum":1296,"atom2_serNum":1332,"donAcc_type":"standard","distance":3.121,"atom1_id":"|1|A|C|60|OP1|||","atom2_id":"|1|A|C|61|N4|||","res_short":"CC","res_long":"|1|A|C|60||||,|1|A|C|61||||","atom_pair":"O:N","residue_pair":"nt:nt"},{"index":113,"atom1_serNum":1496,"atom2_serNum":1512,"donAcc_type":"acceptable","distance":3.164,"atom1_id":"|1|A|U|69|O2'|||","atom2_id":"|1|A|C|70|O4'|||","res_short":"UC","res_long":"|1|A|U|69||||,|1|A|C|70||||","atom_pair":"O:O","residue_pair":"nt:nt"}],"refCoords":{"purine":["   12 ATOMS,    12 BONDS","    1 N      -2.2500   5.0000   0.2500","    2 N      -2.2500   0.5000   0.2500","    3 N      -2.2500   0.5000  -0.2500","    4 N      -2.2500   5.0000  -0.2500","    5 C       2.2500   5.0000   0.2500","    6 C       2.2500   0.5000   0.2500","    7 C       2.2500   0.5000  -0.2500","    8 C       2.2500   5.0000  -0.2500","    9 C      -2.2500   5.0000   0.2500","   10 C      -2.2500   0.5000   0.2500","   11 C      -2.2500   0.5000  -0.2500","   12 C      -2.2500   5.0000  -0.2500","    1     1     2","    2     2     3","    3     3     4","    4     4     1","    5     5     6","    6     6     7","    7     7     8","    8     5     8","    9     9     5","   10    10     6","   11    11     7","   12    12     8"],"pyrimidine":["   12 ATOMS,    12 BONDS","    1 N      -2.2500   5.0000   0.2500","    2 N      -2.2500   2.0000   0.2500","    3 N      -2.2500   2.0000  -0.2500","    4 N      -2.2500   5.0000  -0.2500","    5 C       2.2500   5.0000   0.2500","    6 C       2.2500   2.0000   0.2500","    7 C       2.2500   2.0000  -0.2500","    8 C       2.2500   5.0000  -0.2500","    9 C      -2.2500   5.0000   0.2500","   10 C      -2.2500   2.0000   0.2500","   11 C      -2.2500   2.0000  -0.2500","   12 C      -2.2500   5.0000  -0.2500","    1     1     2","    2     2     3","    3     3     4","    4     4     1","    5     5     6","    6     6     7","    7     7     8","    8     5     8","    9     9     5","   10    10     6","   11    11     7","   12    12     8"],"wc_pair":["   12 ATOMS,    12 BONDS","    1 N      -2.2500   5.0000   0.2500","    2 N      -2.2500  -5.0000   0.2500","    3 N      -2.2500  -5.0000  -0.2500","    4 N      -2.2500   5.0000  -0.2500","    5 C       2.2500   5.0000   0.2500","    6 C       2.2500  -5.0000   0.2500","    7 C       2.2500  -5.0000  -0.2500","    8 C       2.2500   5.0000  -0.2500","    9 C      -2.2500   5.0000   0.2500","   10 C      -2.2500  -5.0000   0.2500","   11 C      -2.2500  -5.0000  -0.2500","   12 C      -2.2500   5.0000  -0.2500","    1     1     2","    2     2     3","    3     3     4","    4     4     1","    5     5     6","    6     6     7","    7     7     8","    8     5     8","    9     9     5","   10    10     6","   11    11     7","   12    12     8"]},"paths":{"pairs":"nt1,nt2","multiplets":"nts_long","helices":"pairs.nt1,nt2","stems":"pairs.nt1,nt2","isoCanonPairs":"nt1,nt2","coaxStacks":"stem_indices.pairs.nt1,nt2","hairpins":"nts_long","bulges":"nts_long","iloops":"nts_long","junctions":"nts_long","kissingLoops":"hairpin_indices.nts_long","ssSegments":"nts_long","stacks":"nts_long","nonStack":"nts_long","hbonds":"res_long;atom1_id,atom2_id","nts":"nt_id"},"counts":{"pairs":34,"multiplets":4,"helices":2,"stems":4,"isoCanonPairs":1,"coaxStacks":2,"hairpins":3,"junctions":1,"kissingLoops":1,"ssSegments":1,"stacks":11,"nonStack":4,"hbonds":113,"nts":76},"metadata":{"version":"DSSR v2.4-2021nov11 by xiangjun@x3dna.org","license":"http://innovation.columbia.edu/technologies/CU20391","url":"http://x3dna.org/","url_alt":"http://home.x3dna.org/","forum":"http://forum.x3dna.org/","citation":"Lu et al. (2015). 'DSSR: an integrated software tool for dissecting the spatial structure of RNA.' Nucleic Acids Res., 43(21):e142 [doi:10.1093/nar/gkv716].","input_file":"/var/www/dssr/tmpfiles/dssr-k5BzYq","str_id":"dssr-k5BzYq","num_naChains":1,"naChains":"A=76","num_atoms":1821,"num_waters":0,"num_metals":9,"metals_desc":"Mg=6,Mn=3","num_notes":52,"notes":[{"Aminors":"A-minor interactions (including types I and II)"},{"Cstem_index":"stem index of the 'Canonical' helix in k-turn"},{"Cstem_pair":"Cstem bp delineating the k-turn internal loop"},{"Dp":"perpendicular distance of the 3' P atom to the glycosidic bond"},{"GA_pair":"sheared G-A pair in k-turn"},{"HtypePknot":"H-type pseudoknot"},{"Kturn":"kink-turn (k-turn)"},{"LW":"Leontis-Westhof"},{"NCstem_index":"stem index of the 'Non-Canonical' helix in k-turn"},{"NCstem_pair":"NCstem bp delineating the k-turn internal loop"},{"Uturn":"U-turn of the UNR- or GNRA-type"},{"aa":"amino acid"},{"atom_pair":"symbols of the two atoms involved in an H-bond"},{"auxfiles":"auxiliary files"},{"glyco_bond":"conformation of base related to sugar (syn or anti)"},{"bb_type":"backbone conformation, BI or BII"},{"bending_angle":"angle between two helical axes"},{"bp":"base pair"},{"bseq":"base sequence in one-letter code"},{"bulge":"bulge loop"},{"coaxStacks":"coaxial stacking of stems within a helix"},{"dbn":"dot bracket notation"},{"desc":"description"},{"donAcc_type":"donor/acceptor type of the atom pair in an H-bond"},{"epsilon_zeta":"difference between epsilon and zeta torsion angles"},{"hairpin":"hairpin loop"},{"hbond":"hydrogen bond (H-bond)"},{"helix":"defined by base-stacking interactions, regardless of bp type and backbone connectivity"},{"id":"identifier"},{"iloop":"internal loop"},{"index":"serial number"},{"isoCanonPairs":"isolated canonical pairs"},{"junction":"(multi-branched) junction loop"},{"kissingLoop":"kissing loop"},{"multiplet":"3+ bases in a coplanar geometry"},{"na":"nucleic acid"},{"nonPair":"two nts not forming a pair, but with H-bonding/stacking interactions"},{"nonStack":"nucleotide not involved in stacking interactions"},{"nt":"nucleotide"},{"num":"number"},{"oArea":"overlap areas between two bases, including exocyclic atoms"},{"oArea_ring":"overlap areas between two bases, including only ring atoms"},{"phosContacts":"H-bonding and atom-capping interactions involving a phosphate"},{"residue_pair":"types of the two residues involved in an H-bond"},{"rmsd":"root-mean-squares deviation"},{"serNum":"serial number"},{"ssSegments":"single-stranded segments not involved in loops"},{"ssZp":"Z-coordinate of the 3' phosphorus atom with reference to the 5' base plane"},{"sstr":"secondary structure in dbn"},{"stem":"helix consisting of only canonical pairs, with a continuous backbone"},{"str_id":"structure identifier, derived from inpfile with extension removed"},{"vert_dist":"vertical distance from an atom to a base plane"}],"start_at":"Sat Apr 20 08:25:42 2024","finish_at":"Sat Apr 20 08:25:43 2024","time_used":"00:00:00:01"}}